Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F21
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   2.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.5  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 101 RLFDYWCPGPGLS 139
           RLF Y CPG  LS
Sbjct: 198 RLFGYLCPGMALS 210


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 216 VATVDAAGRAFVECVKEL 269
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 216 VATVDAAGRAFVECVKEL 269
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 216 VATVDAAGRAFVECVKEL 269
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 80  DLEDFDIRLFDY 115
           +LEDFD RLF++
Sbjct: 301 ELEDFDGRLFEF 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,747
Number of Sequences: 438
Number of extensions: 3036
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)