Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F20
         (514 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       28   0.049
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    25   0.61 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   1.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   5.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.9  

>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 28.3 bits (60), Expect = 0.049
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 143 IKFLINVAIFFMITFSSY 196
           +KFL+NVA+ FM+ + SY
Sbjct: 1   MKFLVNVALVFMVVYISY 18


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 380 GDSHISLVTPLKV*CVNAFQNY 445
           GD+ I ++ P K  CV AFQ +
Sbjct: 397 GDAAIVMLQPTKPMCVEAFQEF 418


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 380 GDSHISLVTPLKV*CVNAFQNY 445
           GD+ I ++ P K  C  AFQ +
Sbjct: 397 GDAAIVMLVPSKPMCAEAFQEF 418


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 249 SDGLISTIEGPCYILPSK*ELNVIIKNIATFIRNLISICGINRMD 115
           SDGL+   +    I+P+  E+N   K +  F     +I  I+ +D
Sbjct: 72  SDGLMCVEKVSTTIVPTTQEINKPFKRLELFNITTTTIHSIHSID 116


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 427 YALNLKRGHKRYMRVTHKIYYHLPT 353
           + +NLK G     R +H+  + +PT
Sbjct: 170 FVVNLKSGSNTIERNSHESXFVVPT 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,573
Number of Sequences: 438
Number of extensions: 2610
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)