Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F11
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   8.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 287 RRNSSRCPNISNYPYDCLVNFASSPCMLRSSHRSE*RC 174
           R N S    I+++  +C   +    C L+ SH     C
Sbjct: 116 RNNGSCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTC 153


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 169 PAHRYSDL*DERSMHGDDAKFTRQSY 246
           P +   D+ D RS+HG   +   Q Y
Sbjct: 85  PPYDRMDIRDRRSLHGPQQQMDGQEY 110


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 370 DRFPVVTDRVRSDVKPSRTFVNFPVATYDEI 278
           D+F  +    R  +K    FV FP+   +++
Sbjct: 212 DKFEQINQHFRRQIKSVDLFVIFPLTKAEKV 242


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 370 DRFPVVTDRVRSDVKPSRTFVNFPVATYDEI 278
           D+F  +    R  +K    FV FP+   +++
Sbjct: 168 DKFEQINQHFRRQIKSVDLFVIFPLTKAEKV 198


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 28  VHLYNIHYIFKLEER 72
           ++LY I+Y FK  ER
Sbjct: 120 INLYTINYNFKESER 134


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 348 SVTTGNLSGSASSVTTTIKRQR 413
           S T+ NLS  ASS ++T   ++
Sbjct: 160 STTSQNLSSPASSTSSTSSTEK 181


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 115 TITGAYRVFASADQPGDNPAHR 180
           T T A    A+ + PG NP  +
Sbjct: 288 TTTDAAEFLAAQEIPGQNPGEK 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,524
Number of Sequences: 336
Number of extensions: 2326
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)