BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_F11
(429 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 25 1.5
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 1.5
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 24 2.6
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 24 2.6
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 4.6
AY745216-1|AAU93483.1| 89|Anopheles gambiae cytochrome P450 pr... 23 6.1
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 6.1
AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein ... 22 8.0
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 24.6 bits (51), Expect = 1.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 100 LRDHSTISSHALPA*KYSEYCIDE 29
++ HS+I+ A+ KY E CI+E
Sbjct: 340 MKQHSSITYEAVHEMKYIEMCINE 363
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 24.6 bits (51), Expect = 1.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 77 ADCGVVSKKDWGGLSPVHIEYLPRPISLVIIQHTVTPT 190
A+ ++S +W ++ H+E P +V+I T PT
Sbjct: 678 AEEAIISVMEW--MARHHLELAPAKTEMVVISSTKAPT 713
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 23.8 bits (49), Expect = 2.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 293 GNGKVYEGSGWLHVGAHTI 349
G+G+V EG G H G H +
Sbjct: 213 GHGRVGEGEGGEHGGEHVV 231
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 23.8 bits (49), Expect = 2.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 376 DPDRFPVVTDRVRSDVKPSRTFVNFPV 296
DP FP + + R+ ++P+R ++ P+
Sbjct: 170 DPAAFPQIREEGRAVLQPNRMSIDIPL 196
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 234 CKLRIVTMHASFVSQVGVTVCWIITRL 154
C LR MH F ++ T C++ RL
Sbjct: 456 CMLRDAGMHKRFWAEAVNTACYLQNRL 482
>AY745216-1|AAU93483.1| 89|Anopheles gambiae cytochrome P450
protein.
Length = 89
Score = 22.6 bits (46), Expect = 6.1
Identities = 8/35 (22%), Positives = 15/35 (42%)
Frame = -3
Query: 229 TSHRHHACFVRLTGRSNGVLDYHQADRPRQILYMH 125
T+HRH CF+ + + Y +++ H
Sbjct: 41 TAHRHPYCFLPFSAGPRNCIGYRYGLMSMKVMLCH 75
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 348 SVTTGNLSGSASSVTTT 398
SV G+ SGSA++ TTT
Sbjct: 128 SVLNGSNSGSATTTTTT 144
>AJ302654-1|CAC35519.1| 168|Anopheles gambiae gSG2-like protein
protein.
Length = 168
Score = 22.2 bits (45), Expect = 8.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 293 GNGKVYEGSGWLHVGAHTIGYNRKSIGISFVGN 391
G G + G G G + G +++ G+ F+GN
Sbjct: 113 GRGVPFFGQGGGQGGIPSFGSGQQNGGVPFLGN 145
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,690
Number of Sequences: 2352
Number of extensions: 10621
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -