Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F11
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   4.4  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   7.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   7.7  
AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced prot...    21   7.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 389 NYNNKEATNQQLE 427
           NYN+KEA N+ ++
Sbjct: 70  NYNDKEAVNEFMQ 82


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 389 NYNNKEATNQQLE 427
           NYN+KEA N+ ++
Sbjct: 70  NYNDKEAVNEFMQ 82


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 NLSGSASSVTTTIKRQRTSN 422
           NLS  +++ T++  R+ TSN
Sbjct: 608 NLSSGSNNQTSSASRENTSN 627


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 ISFVGNYNNKEATNQQL 424
           IS + NYNN    N++L
Sbjct: 90  ISNISNYNNNNNYNKKL 106


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 ISFVGNYNNKEATNQQL 424
           IS + NYNN    N++L
Sbjct: 328 ISNISNYNNNNNYNKKL 344


>AB264336-1|BAF44091.1|   21|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 21

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 196 LTGRSNGVLDYHQA 155
           L G  NGV++YH A
Sbjct: 8   LKGILNGVVNYHNA 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,344
Number of Sequences: 438
Number of extensions: 2944
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)