Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F08
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.                   46   4e-05
BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate o...    46   4e-05
BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.    46   4e-05
AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog prot...    46   4e-05
AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.           46   4e-05
AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.           46   4e-05
AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with simil...    46   4e-05
AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with simil...    46   4e-05
BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein.       29   7.2  
BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein.       29   7.2  
AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RB...    29   7.2  
AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RB...    29   7.2  
AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153k...    29   7.2  
AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA seq...    29   7.2  
AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like prot...    29   7.2  
AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA seq...    29   7.2  
AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein.         29   7.2  
AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein.         29   7.2  

>CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate of
           metastasis 1) protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog
           protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 82

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 45  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82


>AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 100

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   RTKREATEHTNHFDPSGHSRKIVTKLVNTENNKKSNKQ 117
           RTKREA  +TN   P GH RK+VTKL N+E  K+  ++
Sbjct: 63  RTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 100


>BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein.
          Length = 1770

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein
           RBKIN2 protein.
          Length = 1770

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein
           RBKIN1 protein.
          Length = 1805

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153kD,
           the 3' end of a).).
          Length = 1768

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA
           sequence from clone RP11-500C11 on chromosome 6 Contains
            the 5' end of the NUP153 gene for nucleoporin 153kD,
           the 3' end of a).
          Length = 1803

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like protein
           (RBKIN)  ).).
          Length = 1768

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA
           sequence from clone RP3-525L6 on chromosome 6p22.3-23
           Contains the 5' end of a gene for a kinesin-like protein
           (RBKIN)  ).
          Length = 1803

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein.
          Length = 1749

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 269 SHKVSTLLITQTEYDVERGNA*NK 340
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,612,176
Number of Sequences: 237096
Number of extensions: 1476486
Number of successful extensions: 6772
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6772
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)