Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_F07
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0011 - 7337618-7338496,7338596-7338991 69 2e-12
01_01_1152 + 9170628-9171899 68 4e-12
05_06_0044 - 25150322-25151260 66 2e-11
01_06_0824 - 32243495-32244319,32244449-32244859 63 2e-10
11_02_0012 - 7346282-7347136,7347234-7347593 61 5e-10
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 56 2e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 55 3e-08
11_01_0767 + 6438648-6438809,6439146-6440000 52 4e-07
11_01_0771 + 6453130-6454488 50 9e-07
04_04_0620 + 26656072-26656417,26656585-26657396 50 9e-07
04_04_0619 + 26652923-26653267,26653440-26654273 46 2e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 8e-05
08_02_1243 - 25527523-25527960,25527993-25528604 34 0.063
05_03_0392 - 13432385-13432622,13432734-13433104 31 0.59
05_02_0124 + 6849034-6851502 30 1.0
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 30 1.0
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 30 1.4
01_06_0493 + 29773536-29773582,29774209-29774260,29774405-29776405 28 4.1
05_06_0105 + 25607374-25607673,25608319-25608377,25608761-256089... 27 7.2
05_04_0023 + 17233658-17233973,17234101-17234181,17234275-17234366 27 7.2
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 69.3 bits (162), Expect = 2e-12
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +1
Query: 46 SDLRVEMNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFE-GTASFPGLARGQLVR 222
S LR R + D+R+P+F + S++NGVL+ +GV AF+ G A G+A G R
Sbjct: 290 SFLRDHRPTRRREVGDLRVPRFKVSFYSQINGVLQGMGVTAAFDAGEADLSGMAEGVDQR 349
Query: 223 -EALRLSHVLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADRPFMFFIQDE 396
L + V +EVNE G+ A A+T I + D VAD PF FF+ +E
Sbjct: 350 GGGLVVEEVFHRAVVEVNEEGTEAAASTACTIRLLSMSYPED----FVADHPFAFFVVEE 405
Query: 397 VTRQLLFTGRVSEP 438
+ +LF G V +P
Sbjct: 406 TSGAVLFAGHVLDP 419
>01_01_1152 + 9170628-9171899
Length = 423
Score = 68.1 bits (159), Expect = 4e-12
Identities = 41/113 (36%), Positives = 63/113 (55%)
Frame = +1
Query: 100 LPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEV 279
+PKF F + +R+LGV +AF G F G+ G + L ++ V IEV+E+
Sbjct: 314 VPKFKFSFKFEAKSDMRKLGVTRAFAG-GDFSGMVTGG---DGLFIAEVYHQATIEVDEL 369
Query: 280 GSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEP 438
G++A A+T V ++ K V + VADRPF+F + +E+T +LF G V P
Sbjct: 370 GTVAAASTAVVMMQKGSSLPPV--DFVADRPFLFAVVEELTGAVLFLGHVVNP 420
>05_06_0044 - 25150322-25151260
Length = 312
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = +1
Query: 91 DVRLPKFTFEYTSRLNGVLRELGVRQAFEGTA--SFPGLARGQLVREALRLSHVLQTCGI 264
++++PKF + +LRE G+ F A SF G+ + +S +L C +
Sbjct: 195 ELKIPKFEVSLKVEASRLLREFGLDLPFLPAADNSFSGMLLDP--PQGTAVSSLLHQCFV 252
Query: 265 EVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPAI 444
VNE G++A A T VG + F D + + VAD PF+FFI +EV+ ++F G+V P +
Sbjct: 253 NVNEEGTVAAAGT-VGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQVVNPLL 311
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Frame = +1
Query: 100 LPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVR-----EALRLSHVLQTCGI 264
+P+FT Y + LR+LG+R FE +PG ++V E + +S V +
Sbjct: 292 VPRFTLSYKTNAAETLRQLGLRLPFE----YPGADLSEMVESSPEAEKIVVSAVYHESFV 347
Query: 265 EVNEVGSIAYAATQVGIVNKFGEDSDVLYEV--VADRPFMFFIQDEVTRQLLFTGRVSEP 438
EVNE G+ A AAT V + S ++ V VAD PFMF I++++T ++F G+V+ P
Sbjct: 348 EVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAGQVTNP 407
Query: 439 A 441
+
Sbjct: 408 S 408
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 61.3 bits (142), Expect = 5e-10
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 76 RERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFE-GTASFPGLARGQLVREALRLSHVLQ 252
R ++ D+R+P+F + S +N VL+ +G+ AF+ G G+ G+LV + V+
Sbjct: 284 RIKVGDLRVPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVV----VEKVMH 339
Query: 253 TCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVS 432
+EVNE G+ A AAT + + + + VAD PF FF+ +E + +LF G V
Sbjct: 340 RAVVEVNEEGTEAAAATACTMKFLCLTLTSPV-DFVADHPFAFFVVEEKSDAVLFAGHVL 398
Query: 433 EP 438
+P
Sbjct: 399 DP 400
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/116 (31%), Positives = 60/116 (51%)
Frame = +1
Query: 97 RLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNE 276
+LPKF + + +L+ LG++ F A G+ G R L +S + ++V+E
Sbjct: 147 KLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMV-GSPERHNLFVSSLFHKSFVQVDE 205
Query: 277 VGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPAI 444
G+ A AA+ V F + V + VAD PF+F I++++T +LF G V P +
Sbjct: 206 EGTEAAAASAA--VVSF-RSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVNPLL 258
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/112 (31%), Positives = 56/112 (50%)
Frame = +1
Query: 97 RLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNE 276
+LPKF + + +L+ LG+ F A + + L +S V +EVNE
Sbjct: 355 KLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGKN-LFVSSVFHKSFVEVNE 413
Query: 277 VGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVS 432
G+ A AAT I + + + + VAD PF+F IQ+++T +LF G V+
Sbjct: 414 EGTEAAAATAAVITLR---SAPIAEDFVADHPFLFLIQEDMTGVVLFVGHVA 462
Score = 51.2 bits (117), Expect = 5e-07
Identities = 37/116 (31%), Positives = 55/116 (47%)
Frame = +1
Query: 97 RLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNE 276
+LPKF + +G+L+ LG+ F + + L +S V IEVNE
Sbjct: 607 KLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPGAQN-LFVSSVFHKSFIEVNE 665
Query: 277 VGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPAI 444
G+ A AA V + + + VAD PFMF I+++VT +LF G V P +
Sbjct: 666 EGTEATAAVMVSMEHSRPRRLNF----VADHPFMFLIREDVTGVILFIGHVVNPLL 717
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 51.6 bits (118), Expect = 4e-07
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Frame = +1
Query: 97 RLPKFTFEYTSR-LNGVLRELGVRQAFEG-TASFPGLA-RGQLVREALRLSHVLQTCGIE 267
R+PKF + + VLR LG+R F+ A G+A G A+ +S V+ +E
Sbjct: 211 RVPKFKLAFCHYGIADVLRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVVE 270
Query: 268 VNEVGSIAYAATQVGI----VNKFGED---SDVLYEVVADRPFMFFIQDEVTRQLLFTGR 426
VNE GS A A T+ + + +D L + VAD PF FFI +E ++ ++F G
Sbjct: 271 VNEEGSEAAAYTEESDDDLGCSLYDDDYTPPPKLVDFVADHPFAFFIVEERSQAIVFAGH 330
Query: 427 VSEPA 441
V +P+
Sbjct: 331 VLDPS 335
>11_01_0771 + 6453130-6454488
Length = 452
Score = 50.4 bits (115), Expect = 9e-07
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +1
Query: 91 DVRLPKFTFEYTSRLNGVLRELGVRQAFEGT-ASFPGLARGQLVREALRLSHVLQTCGIE 267
+ R+PKF + G L +LG+R F A + L + + IE
Sbjct: 335 EFRVPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIE 394
Query: 268 VNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPAI 444
VNE G++A AAT ++ V + VA+ PF +FI +E++ ++F G + +P++
Sbjct: 395 VNEEGTVAAAATMTRMLPSGVPPPPV--DFVAEHPFAYFIVEEMSSAVVFAGHIVDPSM 451
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 50.4 bits (115), Expect = 9e-07
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +1
Query: 76 RERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQT 255
R+ + ++PKF F G L +LG+ F+ A+ L +S + Q
Sbjct: 256 RQIVTPCKVPKFKFSSQLDAGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQK 315
Query: 256 CGIEVNEVGSIA----YAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTG 423
C +EV+E G+ A Y+ + G + VA+ PFMF I + Q+LF G
Sbjct: 316 CAVEVDEEGTTAVEAMYSPSSPGYSPGYQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLG 375
Query: 424 RVSEPA 441
V +P+
Sbjct: 376 HVMDPS 381
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 46.0 bits (104), Expect = 2e-05
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 100 LPKFTFEYTSRLNGVLRELGVRQAFEGTAS-FPGLARG-QLVREALRLSHVLQTCGIEVN 273
+PKF F G L +LG+ F+ A+ +A E L +S + Q C +EV+
Sbjct: 271 VPKFKFSSELDARGALAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVD 330
Query: 274 EVGSIAYAATQVGIVNKF-GEDSDV--LYEVVADRPFMFFIQDEVTRQLLFTGRVSEPA 441
E G+ A AT + G +S VA+ PFMF I + Q+LF G V +P+
Sbjct: 331 EEGTTAVEATYSCCSPTYSGPESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLGHVMDPS 389
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.0 bits (99), Expect = 8e-05
Identities = 31/118 (26%), Positives = 56/118 (47%)
Frame = +1
Query: 88 VDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIE 267
V + +P F + + L+++G+ F A F + + L LS VL +E
Sbjct: 280 VGISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLE 339
Query: 268 VNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPA 441
V++ G I + +G+ G+ + AD PF F I++EV+ ++F G V +P+
Sbjct: 340 VDQKG-IEETSVSMGL----GKPLPAQH-FKADHPFFFMIREEVSGTVIFMGHVLDPS 391
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 34.3 bits (75), Expect = 0.063
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +2
Query: 320 ISLEKIPTSSTRWWPIDRSCSSSRTKS---PGNCCSPGVSPNPQSSGQ--LVXSKTKQIL 484
+SL + T S+R P CSS T+S PG+ CSP SP ++G L+ ++
Sbjct: 82 VSLPRWCTPSSRGAPT--MCSSPPTQSAAPPGSRCSPSPSPTAAAAGDHPLLTQSPHDLV 139
Query: 485 PVHNLQFHNI 514
P + FH++
Sbjct: 140 PFIEVPFHHL 149
>05_03_0392 - 13432385-13432622,13432734-13433104
Length = 202
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 179 PSKACLTPNSLSTPFKRDVYSNVNLGNLTSTRRSRK 72
PS A P+S S+P V V++G+L+ST+ RK
Sbjct: 142 PSAAAALPSSTSSPLLLVVVGAVSMGSLSSTKSRRK 177
>05_02_0124 + 6849034-6851502
Length = 822
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 151 ELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAY--AATQVGIVNK 324
EL R T+ GLA+ AL L H + G++ N+V IA A + VG+V +
Sbjct: 510 ELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVRE 569
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Frame = +1
Query: 82 RLVDVRLPKFTFEYTSRLNGVLRELGVRQAFE------------GTASFPGLARGQLVRE 225
RL D + YT+ ++ +++ VR A E TA G +L ++
Sbjct: 169 RLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKD 228
Query: 226 ALRLSHVLQTCGIEVNEVGSIAYAATQVG 312
AL + H + +CG+ NE+ ++ +G
Sbjct: 229 ALGVFHEMLSCGVSPNEITLVSVIKACIG 257
>04_04_1658 -
35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 148 RELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAY--AATQVGIVN 321
RE+ R TA G+ + REA+ L +Q G+E +EV +A A + G+V+
Sbjct: 589 REMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVD 648
Query: 322 K 324
+
Sbjct: 649 E 649
>01_06_0493 + 29773536-29773582,29774209-29774260,29774405-29776405
Length = 699
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 142 VLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEV 279
V +G R + T++ GLA + R+ L L +++ G+E N V
Sbjct: 384 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGV 429
>05_06_0105 +
25607374-25607673,25608319-25608377,25608761-25608917,
25609157-25609461,25609866-25609986,25610334-25610422,
25610491-25610569
Length = 369
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 172 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSD 342
F G + ++ R + +V++ CG ++ + GS+ + Q +VN D+D
Sbjct: 176 FGGVGMVVEVLTDKITRSIADIRNVVKDCGAKLADPGSVTFRFRQARVVNIKVTDAD 232
>05_04_0023 + 17233658-17233973,17234101-17234181,17234275-17234366
Length = 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 232 RLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDS 339
++ HV QTC + GSI ++A + + ++G+ S
Sbjct: 40 KICHVKQTCAVTKQLYGSILFSAVKRADIIQYGKTS 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,148,901
Number of Sequences: 37544
Number of extensions: 254370
Number of successful extensions: 775
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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