Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_F07
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 55 4e-08
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 55 4e-08
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 50 1e-06
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 50 1e-06
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 50 1e-06
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 49 2e-06
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 49 2e-06
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 49 2e-06
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 49 2e-06
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 48 6e-06
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 48 6e-06
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 48 6e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 48 6e-06
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 43 1e-04
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 43 1e-04
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 31 0.40
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 31 0.40
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 29 2.1
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 29 2.1
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 29 2.1
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 28 3.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 27 6.5
U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 54.8 bits (126), Expect = 4e-08
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADRPFMFFIQDEVTRQLLFT 420
V IEV+E G+ A AAT V V K S + V AD PF+F + T +F
Sbjct: 305 VTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFMLTQ--TNHPIFL 362
Query: 421 G 423
G
Sbjct: 363 G 363
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 54.8 bits (126), Expect = 4e-08
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADRPFMFFIQDEVTRQLLFT 420
V IEV+E G+ A AAT V V K S + V AD PF+F + T +F
Sbjct: 305 VTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADHPFLFMLTQ--TNHPIFL 362
Query: 421 G 423
G
Sbjct: 363 G 363
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/111 (28%), Positives = 53/111 (47%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
M+N LV++ +PK+ E LN L +G+ +AF +A A G + +S
Sbjct: 1 MSNTSNTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG------IYISQ 54
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDE 396
IEV+E G++A AAT + + ++ E AD PF+F + +
Sbjct: 55 AAHKALIEVDEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFILSKD 105
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
M+N LV++ +PK+ E LN L +G+ +AF +A A G + +S
Sbjct: 260 MSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG------IYISQ 313
Query: 244 VLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADRPFMFFIQDE 396
IEV+E G++A AAT + + ++ E AD PF+F + +
Sbjct: 314 AAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKD 365
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
M+N LV++ +PK+ E LN L +G+ +AF +A A G + +S
Sbjct: 260 MSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG------IYISQ 313
Query: 244 VLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADRPFMFFIQDE 396
IEV+E G++A AAT + + ++ E AD PF+F + +
Sbjct: 314 AAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKD 365
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLL--F 417
V IEV+E G++A AAT+ I + + E A+ PF F + + L F
Sbjct: 305 VTHKALIEVDEDGTVAVAATRCSI-ERCRKKMKENIEFHAEHPFFFILHHGTSYIFLGVF 363
Query: 418 TG 423
TG
Sbjct: 364 TG 365
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLL--F 417
V IEV+E G++A AAT+ I + + E A+ PF F + + L F
Sbjct: 305 VTHKALIEVDEDGTVAVAATRCSI-ERCRKKMKENIEFHAEHPFFFILHHGTSYIFLGVF 363
Query: 418 TG 423
TG
Sbjct: 364 TG 365
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/104 (32%), Positives = 48/104 (46%)
Frame = +1
Query: 76 RERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQT 255
+ ++ +LPKFT E L L+ LG+ F +A GLA E L++S +
Sbjct: 252 KRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSGLA------ENLKISEGVHK 305
Query: 256 CGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 387
IEVNE G+ A A T + V + +AD PF F I
Sbjct: 306 AIIEVNEEGTTAAAVTMMKAV-PMSARMEQPVNFIADHPFFFTI 348
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/104 (32%), Positives = 48/104 (46%)
Frame = +1
Query: 76 RERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQT 255
+ ++ +LPKFT E L L+ LG+ F +A GLA E L++S +
Sbjct: 252 KRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSGLA------ENLKISEGVHK 305
Query: 256 CGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 387
IEVNE G+ A A T + V + +AD PF F I
Sbjct: 306 AIIEVNEEGTTAAAVTMMKAV-PMSARMEQPVNFIADHPFFFTI 348
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGE-DSDVLYEVVADRPFMFFIQDE 396
V IEV+E G+ A AAT V I K + + AD PF F + +
Sbjct: 305 VTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKD 356
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
++N+ V+V++PK+ E L L+ LG+++AF+ A +A G L +S
Sbjct: 251 LSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG------LYVSK 304
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGE-DSDVLYEVVADRPFMFFIQDE 396
V IEV+E G+ A AAT V I K + + AD PF F + +
Sbjct: 305 VTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKD 356
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
+NN+ + + + PKF +Y L L + G+ + F A G+ G L+L+
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG------LQLAS 306
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 387
IEV++VG+ A AAT+ I + L+ + D PF+F I
Sbjct: 307 ATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLH-IRVDHPFLFAI 353
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 47.6 bits (108), Expect = 6e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
+NN+ + + + PKF +Y L L + G+ + F A G+ G L+L+
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG------LQLAS 306
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 387
IEV++VG+ A AAT+ I + L+ + D PF+F I
Sbjct: 307 ATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLH-IRVDHPFLFAI 353
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/120 (28%), Positives = 58/120 (48%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
+N+L+ V V++PKF E L L +G+++ F A G+A + + +S
Sbjct: 246 LNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIA------DKVFISS 299
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTG 423
+ IEV+E G+ A AA+ + + ++ + VAD PF+F + E LF G
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPT-QFVADHPFLFAVLFE--NHTLFLG 356
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/120 (28%), Positives = 58/120 (48%)
Frame = +1
Query: 64 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 243
+N+L+ V V++PKF E L L +G+++ F A G+A + + +S
Sbjct: 246 LNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIA------DKVFISS 299
Query: 244 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTG 423
+ IEV+E G+ A AA+ + + ++ + VAD PF+F + E LF G
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPT-QFVADHPFLFAVLFE--NHTLFLG 356
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 323 SLEKIPTSSTRWWPIDRSCSSSRTKSPGNC 412
S++K+ +S +W PI++ CSS + K +C
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSC 428
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 323 SLEKIPTSSTRWWPIDRSCSSSRTKSPGNC 412
S++K+ +S +W PI++ CSS + K +C
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSC 428
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 432 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 256
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 919 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 978
Query: 255 C 253
C
Sbjct: 979 C 979
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 432 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 256
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 822 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 881
Query: 255 C 253
C
Sbjct: 882 C 882
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 432 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 256
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 833 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 892
Query: 255 C 253
C
Sbjct: 893 C 893
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 259 GIEVNEVGSIA-YAATQVGI--VNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRV 429
G E + GS A Y +QV I V + +++DV++E + PF FI E + +
Sbjct: 8 GSEAADTGSEASYKVSQVEIEDVEENLKNADVIFEHLEQLPFQVFILSEFGKPIFVNNDR 67
Query: 430 SEPAIV 447
+E IV
Sbjct: 68 NEGEIV 73
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 247 LQTCGIEVNEVGSIAYAATQVGIV 318
L++CG +N G++ + TQVG +
Sbjct: 322 LESCGFSINRDGTVEFKWTQVGCI 345
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 301 TQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSE 435
T +G+ +FG D +L+ D P + + ++ R + GR+++
Sbjct: 374 TLMGLAQRFGFDYLILWAARIDNPTLTLTKTDIKRSKISKGRLNQ 418
>U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical
protein T19D12.9 protein.
Length = 462
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 384 EEHERSIGHHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNATCLQDV 241
EE + + D F LI CC + N I+F+ C+QDV
Sbjct: 5 EEQQTNQKRFTFADKTRFIVLIIGLCCICCTNANYNAINFSVICMQDV 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,392,527
Number of Sequences: 27780
Number of extensions: 228651
Number of successful extensions: 754
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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