Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F04
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-5|CAL36508.1|  709|Caenorhabditis elegans Hypothetical pr...   125   2e-29
Z46935-3|CAE48508.1|  794|Caenorhabditis elegans Hypothetical pr...   125   2e-29
Z46935-2|CAA87052.1|  792|Caenorhabditis elegans Hypothetical pr...   125   2e-29
Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical pr...    29   1.3  
AC087081-8|AAY55899.1|  499|Caenorhabditis elegans Hypothetical ...    29   1.3  
AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical ...    29   1.7  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U58727-2|AAB00582.2|  462|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AF078785-3|AAC27091.2|  481|Caenorhabditis elegans Hypothetical ...    27   9.3  
AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z46935-5|CAL36508.1|  709|Caenorhabditis elegans Hypothetical
           protein M106.4c protein.
          Length = 709

 Score =  125 bits (301), Expect = 2e-29
 Identities = 61/102 (59%), Positives = 72/102 (70%)
 Frame = +2

Query: 176 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 355
           PE KRKIIG+ FIR+ +  + DLN+  D+  L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 323 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 382

Query: 356 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVE 481
           NDT             EPLKDFHKDEVR LG +LGLP ++V+
Sbjct: 383 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQ 424


>Z46935-3|CAE48508.1|  794|Caenorhabditis elegans Hypothetical
           protein M106.4b protein.
          Length = 794

 Score =  125 bits (301), Expect = 2e-29
 Identities = 61/102 (59%), Positives = 72/102 (70%)
 Frame = +2

Query: 176 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 355
           PE KRKIIG+ FIR+ +  + DLN+  D+  L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 408 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 467

Query: 356 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVE 481
           NDT             EPLKDFHKDEVR LG +LGLP ++V+
Sbjct: 468 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQ 509


>Z46935-2|CAA87052.1|  792|Caenorhabditis elegans Hypothetical
           protein M106.4a protein.
          Length = 792

 Score =  125 bits (301), Expect = 2e-29
 Identities = 61/102 (59%), Positives = 72/102 (70%)
 Frame = +2

Query: 176 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 355
           PE KRKIIG+ FIR+ +  + DLN+  D+  L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 406 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 465

Query: 356 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVE 481
           NDT             EPLKDFHKDEVR LG +LGLP ++V+
Sbjct: 466 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQ 507


>Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical
           protein ZK669.2 protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -3

Query: 185 CLQAKSR--GRVEACDVPARPRPPQDRSRVWQCCQPRTDVKRLRRGVERPVHVNTSL 21
           C+Q K++    V+ C V  RPRP  D + + +C Q +   K + +   R   V + L
Sbjct: 164 CMQGKNKFSSAVDDCIVNFRPRPDLDENFMARCAQSQLGAKLMMQHGYRQKEVASEL 220


>AC087081-8|AAY55899.1|  499|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.18 protein.
          Length = 499

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 173 KSRGRVEACDVPARPRPPQDRSRVWQCCQPRTDVKRLRRGVERPVHVNTSL 21
           K RGRV   +V  R + P +   V QCC+P    + +   +E+P    TSL
Sbjct: 129 KLRGRVHTQNVSIRFQNPCNIIAVLQCCEP----ENIHLAMEKPTDFFTSL 175


>AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical
           protein Y11D7A.13 protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 203 DVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLI 301
           D+F +I+E  +HD+ +   + LL    LR DLI
Sbjct: 281 DLFNKISEMEIHDMEMTLTKFLLENRELRTDLI 313


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  SSKVERCLRELGVRLHVVNASHQFAVGSTAIRENG--PAGVAGGRVRHTPLLCHAISPED 184
           S K+   L ++GV+ H V   +   VGS ++  +   PA ++G +      L   +S + 
Sbjct: 130 SPKIYGLLSDIGVKTHSVMKFYDEHVGSRSVNRSDLEPANLSGSQWVTADKLKKKLSEKF 189

Query: 185 KRKIIGDVFI 214
            +++ G V I
Sbjct: 190 SKELYGQVII 199


>U58727-2|AAB00582.2|  462|Caenorhabditis elegans Hypothetical
           protein D1005.2 protein.
          Length = 462

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 293 DLIESASALCSTNAATIKTHHN 358
           DL+   S LC  + +T K HHN
Sbjct: 359 DLLSLRSTLCDLDHSTFKVHHN 380


>AF078785-3|AAC27091.2|  481|Caenorhabditis elegans Hypothetical
           protein C04E12.5 protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 279 PCPRSTWSSCKLRSCTACSAILMKTSPMIFRLS 181
           P PR  W +  ++  T    +LM T+P++F LS
Sbjct: 24  PQPRDRWKTI-IKITTTFIGVLMVTTPIVFGLS 55


>AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical
           protein C41D11.6 protein.
          Length = 852

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 164 HAISPEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQ 277
           HA+   D    I    +R A+ AVH L + ED VL+ Q
Sbjct: 524 HAVQSTDAITTIECRILRPADNAVHILAVGEDAVLIKQ 561


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,662,203
Number of Sequences: 27780
Number of extensions: 211966
Number of successful extensions: 546
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)