Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_F04
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   5.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 101 WQCCQPRTDVKRLRRGVER 45
           WQC   +TD++   RG  R
Sbjct: 66  WQCNDKKTDIEETGRGKGR 84


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 117 GPFSRMAVLPTAN*CEAFTTWSRTPSSRK 31
           GP +  AV+ T+N   A TT + T  +R+
Sbjct: 237 GPATPSAVVATSNATAAMTTGTTTIPTRR 265


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 41  LGVRLHVVNASHQFAVGST 97
           L + LH+ NA  ++ +GST
Sbjct: 680 LPLDLHIQNAIREYGLGST 698


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 361 VVMMGLYCCRIC*AK 317
           +VM+G+YC   C A+
Sbjct: 206 IVMLGIYCRLYCYAQ 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,827
Number of Sequences: 438
Number of extensions: 2340
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)