Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E24
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016987-1|AAH16987.1|  284|Homo sapiens FAM44A protein protein.       30   4.0  
AL137350-1|CAB70705.1|  438|Homo sapiens hypothetical protein pr...    30   4.0  
AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.     30   4.0  

>BC016987-1|AAH16987.1|  284|Homo sapiens FAM44A protein protein.
          Length = 284

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 230 TSAIYQKKSRQNGSSRSGDYPEQISRQTERRTERDKKIII 349
           TS + ++K   + S  +G+ PEQ    T +  E D+ III
Sbjct: 65  TSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIII 104


>AL137350-1|CAB70705.1|  438|Homo sapiens hypothetical protein
           protein.
          Length = 438

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 230 TSAIYQKKSRQNGSSRSGDYPEQISRQTERRTERDKKIII 349
           TS + ++K   + S  +G+ PEQ    T +  E D+ III
Sbjct: 389 TSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIII 428


>AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.
          Length = 1804

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 230  TSAIYQKKSRQNGSSRSGDYPEQISRQTERRTERDKKIII 349
            TS + ++K   + S  +G+ PEQ    T +  E D+ III
Sbjct: 1585 TSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIII 1624


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,135,108
Number of Sequences: 237096
Number of extensions: 1070133
Number of successful extensions: 2126
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)