Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E20
(408 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 3.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 3.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 3.1
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 21 4.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 4.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 7.1
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 7.1
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 7.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 9.4
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 9.4
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 3.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 68 LLLQASIGYDDRLP 27
++LQA YDDR+P
Sbjct: 532 IILQAPTLYDDRIP 545
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 3.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 133 GFYKRTVRK 107
GF+KRTVRK
Sbjct: 132 GFFKRTVRK 140
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 3.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 133 GFYKRTVRK 107
GF+KRTVRK
Sbjct: 132 GFFKRTVRK 140
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 407 TFFALPLLFHPSTFIFITILLKC 339
TFF L ++ S F+ T+ +KC
Sbjct: 8 TFFFLSVILITSYFVTPTMSIKC 30
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 68 LLLQASIGYDDRLP 27
++LQA YDDR+P
Sbjct: 537 IILQAPTLYDDRVP 550
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 68 LLLQASIGYDDRLP 27
++LQA YDDR+P
Sbjct: 537 IILQAPTLYDDRVP 550
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +1
Query: 52 DACNSRRITCALPTLLRQTFSRSFCRTPYCIPLTKTI 162
++C I C + +++FC YC+ L K +
Sbjct: 434 ESCLPEEILCPHFNVTDGETTKTFCCKGYCMDLLKEL 470
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 20.6 bits (41), Expect = 7.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 312 IPRQKGTFQLFYH 274
+ RQK ++LF+H
Sbjct: 32 VTRQKNIYELFWH 44
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 20.6 bits (41), Expect = 7.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 312 IPRQKGTFQLFYH 274
+ RQK ++LF+H
Sbjct: 32 VTRQKNIYELFWH 44
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 20.6 bits (41), Expect = 7.1
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = -1
Query: 393 SSTFPSFHIHIHYYFTQMRFLSSHNMSIPRQKGTFQLFYHWQNFQTPSNI 244
SS F +I + FT + ++ IP+ F LF + P N+
Sbjct: 148 SSEFCGKNIGMKRIFTSSQNIAVIEYRIPKSGKGFSLFARFLKNPRPCNV 197
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 394 FLYFSILPHSYSLLFYSNAL 335
F++ ++P + +LFYS L
Sbjct: 225 FIWAYVIPLIFIILFYSRLL 244
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 394 FLYFSILPHSYSLLFYSNAL 335
F++ ++P + +LFYS L
Sbjct: 225 FIWAYVIPLIFIILFYSRLL 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,487
Number of Sequences: 438
Number of extensions: 2118
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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