Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E18
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125070-1|AAI25071.1|  587|Homo sapiens chromosome 14 open read...    32   1.4  
AK098187-1|BAC05253.1|  587|Homo sapiens protein ( Homo sapiens ...    32   1.4  
AK001077-1|BAA91495.1|  161|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat...    29   10.0 
AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.     29   10.0 

>BC125070-1|AAI25071.1|  587|Homo sapiens chromosome 14 open reading
           frame 39 protein.
          Length = 587

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 94  NGHCEIMHLWRRNHTQKIKSLVRIALRNPEKQYERNQYTEEGTK*YYYAERAPYRQ 261
           + H +  H+     +QK    +++ L  P+KQ   NQ++E+G K   Y ++   RQ
Sbjct: 332 DNHSKCSHITTITSSQKF---MQVRLLTPQKQSNSNQWSEKGDKDAEYGDKGTVRQ 384


>AK098187-1|BAC05253.1|  587|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40868 fis, clone TSTOM1000186. ).
          Length = 587

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 94  NGHCEIMHLWRRNHTQKIKSLVRIALRNPEKQYERNQYTEEGTK*YYYAERAPYRQ 261
           + H +  H+     +QK    +++ L  P+KQ   NQ++E+G K   Y ++   RQ
Sbjct: 332 DNHSKCSHITTITSSQKF---MQVRLLTPQKQSNSNQWSEKGDKDAEYGDKGTVRQ 384


>AK001077-1|BAA91495.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10215 fis, clone HEMBA1006737, weakly similar to
           ANKYRIN, BRAIN VARIANT 2. ).
          Length = 161

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  LDYISNNGHCEIMHLWRRNHTQKIKSLVR 162
           +D++  NG C ++H   R H + +K L++
Sbjct: 95  VDHLDKNGQCALVHAALRGHLEVVKFLIQ 123


>AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat
           containing protein protein.
          Length = 1101

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  LDYISNNGHCEIMHLWRRNHTQKIKSLVR 162
           +D++  NG C ++H   R H + +K L++
Sbjct: 45  VDHLDKNGQCALVHAALRGHLEVVKFLIQ 73


>AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.
          Length = 1864

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  LDYISNNGHCEIMHLWRRNHTQKIKSLVR 162
           +D++  NG C ++H   R H + +K L++
Sbjct: 818 VDHLDKNGQCALVHAALRGHLEVVKFLIQ 846


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,308,093
Number of Sequences: 237096
Number of extensions: 1448587
Number of successful extensions: 2104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)