Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E17
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   2.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -2

Query: 300 CKKSLRVHCYTLSYANPAVAAPNF 229
           C K     C TL Y N  V  P F
Sbjct: 563 CNKKQPSDCDTLEYRNGEVTTPLF 586


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 274 LHIVVCQS-SCSGSQLHLVSEINGAKSTELVVFVASYRYLDY 152
           L +VVC   +C G     V E +  K    +  +  ++YLDY
Sbjct: 5   LLLVVCLGIACQGITSVTVRENSPRKLANSMNVIHEWKYLDY 46


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +2

Query: 47  YYIEQYDDQPEQWGNSRVRRQAGALTINSDGTSGAIVK 160
           YY+        Q+G + V+ Q     +N+   + A+ K
Sbjct: 274 YYVNTAPFMKSQFGENNVQYQGSEDILNTQSLAKAVSK 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,134
Number of Sequences: 438
Number of extensions: 2293
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)