Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E16
         (582 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  33   0.56 
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   0.56 
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    33   0.56 

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 159   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 296
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 11113 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 11158


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 159   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 296
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 18537 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 18582


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 33.5 bits (73), Expect = 0.56
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 159   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 296
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 11113 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 11158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,424,681
Number of Sequences: 237096
Number of extensions: 1683582
Number of successful extensions: 10089
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10089
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)