Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E16
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical...    27   7.4  
Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical ...    27   9.7  
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ...    27   9.7  
AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF039042-4|AAC48247.2|  332|Caenorhabditis elegans Serpentine re...    27   9.7  

>AC024876-12|AAF60896.2|  498|Caenorhabditis elegans Hypothetical
           protein Y94H6A.1 protein.
          Length = 498

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 159 PTNVVDINSTEMGRFSPSRDRDISGPVINYFYEKQDVSLSTIDITSQVDPHMNKY 323
           P  V  +    MG + P   ++  G V+ YF E    S S  D TSQV   ++ +
Sbjct: 137 PEEVGRLRDMRMGDYLPIVKKE--GCVVGYFDESSQPSTSIEDCTSQVHSFIDTF 189


>Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical
           protein W07A8.2c protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 292 KDYLHTIFHELRDNMTWKSVHISS 315


>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 266 KDYLHTIFHELRDNMTWKSVHISS 289


>Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical
           protein W07A8.2a protein.
          Length = 1023

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 268 KDYLHTIFHELRDNMTWKSVHISS 291


>U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical
           protein R08C7.4 protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 414 GSQWGQGHKYLSDHLHSAHYLTLRNEYRDQIMSKAVITRNMSTDQR 551
           G  +G+  K+L    +  HY  +   YR +  SK V+  NM  D+R
Sbjct: 120 GPMYGEESKWLEIIEYVEHYRLVECHYRSKFHSKWVV--NMDIDER 163


>AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical
           protein W07A8.2c protein.
          Length = 1047

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 292 KDYLHTIFHELRDNMTWKSVHISS 315


>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 266 KDYLHTIFHELRDNMTWKSVHISS 289


>AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical
           protein W07A8.2a protein.
          Length = 1023

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  KLYTKCNFQNIGSNLTWKEVHVTS 122
           K Y    F  +  N+TWK VH++S
Sbjct: 268 KDYLHTIFHELRDNMTWKSVHISS 291


>AF039042-4|AAC48247.2|  332|Caenorhabditis elegans Serpentine
           receptor, class i protein27 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 575 FFFSTYRSSLICTHVSSDDSFAHYLVSILIS 483
           FF +T+   LI  H S  DSF  YL++  IS
Sbjct: 29  FFLNTFVIYLIIFHSSRLDSFKFYLLAFQIS 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,188,062
Number of Sequences: 27780
Number of extensions: 276404
Number of successful extensions: 661
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)