Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E14
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0124 + 971213-971341,971741-971769,971877-972078,972839-97... 83 2e-16
06_03_0629 + 22920206-22920291,22920430-22920527,22920657-229207... 42 3e-04
01_06_0711 + 31388369-31388799,31388907-31389079,31389852-313899... 34 0.091
10_08_1027 - 22404169-22404807,22406148-22406360,22407062-224072... 30 1.5
05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82... 29 2.0
05_07_0260 - 28739035-28739085,28739316-28739596,28740545-287405... 29 3.4
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 28 4.5
04_04_1002 - 30025914-30026021,30026116-30026297,30026626-300269... 28 4.5
04_03_0379 + 15141127-15141231,15141566-15141769,15141856-151420... 28 4.5
04_03_0349 - 14738360-14738385,14738762-14738807,14738887-147391... 28 4.5
03_02_0129 + 5785583-5787163,5787923-5788090 28 4.5
08_01_0447 + 3954917-3954919,3954965-3955217,3955763-3956126,395... 28 6.0
01_05_0788 + 25223373-25223405,25224285-25224373,25224496-252246... 28 6.0
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 27 7.9
>03_01_0124 +
971213-971341,971741-971769,971877-972078,972839-973081,
973172-973273,973743-974180
Length = 380
Score = 82.6 bits (195), Expect = 2e-16
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 31/193 (16%)
Frame = +1
Query: 1 LMCVGLTMFTLADSSTSPNFDFVGVVVISLALLCDAIIGNVQEKAMKQF-QATNNEVVFY 177
++ +GL +FTLAD+ +SPNF +GV ++S AL+ DA +GN+QE K T E++F
Sbjct: 148 MLVIGLILFTLADAQSSPNFSMIGVAMVSGALVMDAFLGNLQEAIFKMNPDTTQMEMLFC 207
Query: 178 SYAIACVYLVIITGMSGVLTDGFVYCTDNP-----------STMYGNVFLLSLSGYMGLQ 324
S + +LV+ ++G L + C+ + +T G V +LSL G
Sbjct: 208 STVVGLPFLVVPMVLTGELMRAWTACSQHMYVYAVLVFEAMATFVGQVSVLSLIALFGAA 267
Query: 325 A---VLTLVRICGAT----------------VAVTVTTMRKALSIVISFLLFSKPFVFQY 447
V TLV + T + V VTT RKA+++++S+L+F+KP Q+
Sbjct: 268 TTAMVRTLVLLLKVTEFAPDKTGRKTNFSVVLIVQVTTARKAVTLLLSYLIFTKPLTEQH 327
Query: 448 AWSGMLVVLAIYL 486
+L+ + I L
Sbjct: 328 VTGLLLISMGIVL 340
>06_03_0629 +
22920206-22920291,22920430-22920527,22920657-22920796,
22921596-22921626,22922025-22922128,22922439-22922560,
22922651-22923050,22923245-22923268
Length = 334
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 250 YCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIVISFLLFSK 429
+C +NP + ++ L L G +G + + G+ T+TT RK +SIVIS ++
Sbjct: 240 FCQENPEVAW-DILLFCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFMSIVISSVISGN 298
Query: 430 PFVFQYAWSGMLVVLA 477
P + W +++V +
Sbjct: 299 PLSLK-QWGSVVMVFS 313
>01_06_0711 +
31388369-31388799,31388907-31389079,31389852-31389937,
31390041-31390090,31390598-31390665,31391490-31391674,
31391884-31391970,31392075-31392169,31392509-31392635
Length = 433
Score = 33.9 bits (74), Expect = 0.091
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 DNPSTMYGNVFLLSLSGYMGLQAVLTLVRICGATVAVTVTT---MRKALSIVISFLLFSK 429
DN + + + L+ L G + VLT + T AVTVT +++A++I+++ L F+
Sbjct: 309 DNSTHIIRSSLLMLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVAVLFFND 368
Query: 430 PFVFQYAWSGMLVVLAIYLNHYSKKH 507
F + +++ + L + K H
Sbjct: 369 TFTWLKGLGLGIIIFGVSLFNLYKYH 394
>10_08_1027 -
22404169-22404807,22406148-22406360,22407062-22407255,
22407422-22407566,22407801-22407875,22408222-22408380,
22408466-22408645,22408756-22409243,22409375-22409738,
22409811-22409943,22410023-22410153,22410247-22410354,
22410451-22410897,22411425-22411514,22411607-22411915,
22412209-22412320,22412488-22412699
Length = 1332
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 351 AYPYQR*HSLQAHVPAQTQQKYITIHSTRIISTVHKSIREDPTH 220
AYP + Q +PA T K IH + +T H S+ + H
Sbjct: 562 AYPKDENYGFQHAMPASTATKISVIHDNGLPNTTHSSVDYELPH 605
>05_01_0119 +
820566-820739,822708-822737,823153-823266,823341-823433,
823521-823586,824076-824174,824480-824559,825039-825151,
825600-825688,825955-826041,826128-826130,826285-826383
Length = 348
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/112 (22%), Positives = 46/112 (41%)
Frame = +1
Query: 103 DAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYG 282
D Q+K K + + +FY+ +CV + + + + +P Y
Sbjct: 221 DGFTSTFQDKLFKGYDMEIHNQIFYTTMCSCVLSLSGLILQNQMIPAVDFMFRHPDCFY- 279
Query: 283 NVFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIVISFLLFSKPFV 438
+V +LS + +R GA T+ T R+ L+IV L++K F+
Sbjct: 280 DVIILSSVATASQFFISYTIRTFGALTFATIMTTRQ-LAIVFG-ALYTKSFL 329
>05_07_0260 -
28739035-28739085,28739316-28739596,28740545-28740572,
28740653-28740749,28741216-28741272,28741353-28741415,
28741533-28741621,28741779-28741865,28742041-28742162,
28742245-28742500,28742595-28742744,28743120-28743278,
28743820-28743892,28743968-28744024,28744115-28744243,
28744469-28744560,28745220-28745252
Length = 607
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 370 TVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSKKHPNYVPLPLIAVWH 546
+V ++ A + L++ P VF++ W+ +L Y P+ LPL+ WH
Sbjct: 282 SVMAIKIACCFLTVILIWEIPGVFEFLWAPFTFLLG-----YKDPEPSKANLPLLHEWH 335
>10_08_0971 - 21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 355 ATVAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHY 495
+T A V TMR++ I +F+ + FV + ++ + +++ HY
Sbjct: 907 STFAAEVYTMRRSGQIARAFVYAAATFVLSFVLGTLIYSVPVWVEHY 953
>04_04_1002 -
30025914-30026021,30026116-30026297,30026626-30026908,
30026992-30027630
Length = 403
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 309 PAQTQQKYITIHSTRIISTVHKSIREDPTHTGYY 208
PA +QK + +++ +I + +S+ T TGYY
Sbjct: 199 PANLEQKILQLNAEKITCLLKRSLTSKQTLTGYY 232
>04_03_0379 +
15141127-15141231,15141566-15141769,15141856-15142037,
15142898-15143036,15143111-15143299,15143943-15144050,
15144143-15144222,15144549-15144600,15144731-15144799,
15144876-15144910,15145351-15145510,15147414-15147470,
15147566-15147622,15147971-15148027,15148126-15148182,
15148551-15148670,15148760-15148996,15149550-15149591
Length = 649
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 450 SVLEDKW-FAEQQERYNY*QSFPHGGDRYGDGGTAYPYQR*HSLQAHVPAQTQQKYITI 277
S+ ++KW F +++ YN S DR +G P+Q H + Q+KY T+
Sbjct: 365 SLKDEKWEFIAEEQDYNPDASPDMLEDRSDEGSLGQPFQDVHKAASSHSFVIQEKYNTV 423
>04_03_0349 -
14738360-14738385,14738762-14738807,14738887-14739123,
14739213-14739332,14739702-14739758,14740262-14740318,
14740412-14740468,14742372-14742531,14742972-14743006,
14743083-14743151,14743282-14743333,14743660-14743739,
14743832-14743939,14744583-14744771,14744846-14744984,
14745845-14746026,14746113-14746316,14746651-14746755
Length = 640
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 450 SVLEDKW-FAEQQERYNY*QSFPHGGDRYGDGGTAYPYQR*HSLQAHVPAQTQQKYITI 277
S+ ++KW F +++ YN S DR +G P+Q H + Q+KY T+
Sbjct: 365 SLKDEKWEFIAEEQDYNPDASPDMLEDRSDEGSLGQPFQDVHKAASSHSFVIQEKYNTV 423
>03_02_0129 + 5785583-5787163,5787923-5788090
Length = 582
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 81 NNHSYKVEIWRCA*IGQSEHG 19
NNH Y + + C +GQ EHG
Sbjct: 432 NNHLYNIALMSCERLGQWEHG 452
>08_01_0447 +
3954917-3954919,3954965-3955217,3955763-3956126,
3956217-3956435,3957734-3957869,3958261-3958362,
3958439-3958690,3958796-3959092
Length = 541
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 285 CIFAEFERVHGPASCVNVGTDMRCHRRRN-GHHHEESSVNSYIV 413
C+ E + +CV + D+ +R G HH S++ SY++
Sbjct: 418 CLLTYPELLKSFTTCVRLSNDIASTKREQAGDHHHASTIQSYML 461
>01_05_0788 +
25223373-25223405,25224285-25224373,25224496-25224624,
25224710-25224766,25224844-25224916,25225509-25225667,
25226755-25226904,25227013-25227268,25227358-25227479,
25227531-25227599,25227653-25227739,25227842-25227930,
25228168-25228224,25229162-25229258,25229348-25229506
Length = 541
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 370 TVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSKKHPNYVPLPLIAVWH 546
+V M+ + L++ P VF+ WS +L Y P+ LPL+ WH
Sbjct: 281 SVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFLLG-----YKDPEPSKANLPLLHEWH 334
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = -3
Query: 363 DGGTAYPYQR*HSLQAHVPAQTQQKYITIHSTRIISTVHKSIRE-----DPTHTGYYDKI 199
+G T+ P++ + + +T + +HS +H+ I+ D + T
Sbjct: 512 EGPTSLPWED----RLRIATETARSLTYLHSAVSFPIIHRDIKSHNILLDGSLTAKVSDF 567
Query: 198 YASDCI*IEDNFIISSLKLFHGFLLNITYY 109
AS CI E N + ++++ G+L I YY
Sbjct: 568 GASRCIPTEQNGVTTAIQGTLGYLDPIYYY 597
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,730,758
Number of Sequences: 37544
Number of extensions: 326751
Number of successful extensions: 901
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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