Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E14
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00067-10|ABD94100.1| 247|Caenorhabditis elegans Hypothetical p... 177 3e-45
U00067-9|AAK20073.1| 364|Caenorhabditis elegans Hypothetical pr... 177 3e-45
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 50 2e-06
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 50 2e-06
AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical... 49 2e-06
AF036696-3|ABB51190.1| 292|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF036696-2|AAB88349.1| 324|Caenorhabditis elegans Hypothetical ... 46 1e-05
Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical pr... 39 0.002
U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva ... 34 0.062
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 33 0.11
Z37092-8|CAA85460.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical pr... 31 0.58
AY037792-1|AAK94756.1| 327|Caenorhabditis elegans SRA-12 protein. 31 0.58
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 29 1.8
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC084158-29|AAL27264.2| 666|Caenorhabditis elegans Yeast smf (d... 28 4.1
Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine rec... 28 5.4
AL023816-3|CAA19432.1| 296|Caenorhabditis elegans Hypothetical ... 28 5.4
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical pr... 27 7.1
U40409-3|ABO16455.1| 681|Caenorhabditis elegans Related to yeas... 27 7.1
U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeas... 27 7.1
U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeas... 27 7.1
U41995-2|AAA83460.1| 317|Caenorhabditis elegans Serpentine rece... 27 9.4
U23183-3|AAA64340.3| 496|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC006636-2|AAF39797.1| 325|Caenorhabditis elegans Hypothetical ... 27 9.4
>U00067-10|ABD94100.1| 247|Caenorhabditis elegans Hypothetical
protein F54E7.1b protein.
Length = 247
Score = 177 bits (432), Expect = 3e-45
Identities = 83/172 (48%), Positives = 120/172 (69%)
Frame = +1
Query: 1 LMCVGLTMFTLADSSTSPNFDFVGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYS 180
LM +G+ MFTLAD+ SPNFD G ++I ALL DA+IGN+QEK MK++ ++NE+V YS
Sbjct: 49 LMSLGIIMFTLADNKVSPNFDSRGYIMICGALLADAVIGNIQEKNMKKYGGSSNEMVLYS 108
Query: 181 YAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICGAT 360
Y I V++ +SG + + +N +G +LS GY+G+ VLT +++ GA
Sbjct: 109 YGIGSVFIFAFVVLSGEVFSAIPFFLENSWKTFGYALILSCLGYLGVNVVLTHIKVFGAL 168
Query: 361 VAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSKKHPNY 516
VAVTVTT+RKAL+I++SF+LFSKPF +Y ++G +V+LAIYLN YSK ++
Sbjct: 169 VAVTVTTLRKALTIILSFMLFSKPFTIEYVYAGSVVMLAIYLNLYSKNKTSW 220
>U00067-9|AAK20073.1| 364|Caenorhabditis elegans Hypothetical
protein F54E7.1a protein.
Length = 364
Score = 177 bits (432), Expect = 3e-45
Identities = 83/172 (48%), Positives = 120/172 (69%)
Frame = +1
Query: 1 LMCVGLTMFTLADSSTSPNFDFVGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYS 180
LM +G+ MFTLAD+ SPNFD G ++I ALL DA+IGN+QEK MK++ ++NE+V YS
Sbjct: 166 LMSLGIIMFTLADNKVSPNFDSRGYIMICGALLADAVIGNIQEKNMKKYGGSSNEMVLYS 225
Query: 181 YAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICGAT 360
Y I V++ +SG + + +N +G +LS GY+G+ VLT +++ GA
Sbjct: 226 YGIGSVFIFAFVVLSGEVFSAIPFFLENSWKTFGYALILSCLGYLGVNVVLTHIKVFGAL 285
Query: 361 VAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSKKHPNY 516
VAVTVTT+RKAL+I++SF+LFSKPF +Y ++G +V+LAIYLN YSK ++
Sbjct: 286 VAVTVTTLRKALTIILSFMLFSKPFTIEYVYAGSVVMLAIYLNLYSKNKTSW 337
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Frame = +1
Query: 13 GLTMFTLADSS-----TSPNFDFVGVVVISLALLCDAIIGNVQEKAMK-QFQATNNEVVF 174
G ++F L+ SS T F G+++++ LL DA N Q+ + + + +++F
Sbjct: 261 GASLFLLSSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMF 320
Query: 175 YSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICG 354
+ + + G L + ++ +VFLLSLSG +G + + + G
Sbjct: 321 GVNFFSAILCAVSLIEQGTLWSSIKFGAEHVD-FSRDVFLLSLSGAIGQIFIYSTIERFG 379
Query: 355 ATVAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSK 501
V + T+R+ LSIV+S +++ F A M+V AI+++ + K
Sbjct: 380 PIVFAVIMTIRQMLSIVLSTIMYGHELTFLAAIGFMIVFAAIFVDIHKK 428
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Frame = +1
Query: 13 GLTMFTLADSS-----TSPNFDFVGVVVISLALLCDAIIGNVQEKAMK-QFQATNNEVVF 174
G ++F L+ SS T F G+++++ LL DA N Q+ + + + +++F
Sbjct: 246 GASLFLLSSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMF 305
Query: 175 YSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICG 354
+ + + G L + ++ +VFLLSLSG +G + + + G
Sbjct: 306 GVNFFSAILCAVSLIEQGTLWSSIKFGAEHVD-FSRDVFLLSLSGAIGQIFIYSTIERFG 364
Query: 355 ATVAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSK 501
V + T+R+ LSIV+S +++ F A M+V AI+++ + K
Sbjct: 365 PIVFAVIMTIRQMLSIVLSTIMYGHELTFLAAIGFMIVFAAIFVDIHKK 413
>AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical
protein Y111B2A.20 protein.
Length = 340
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 1 LMCVGLTMFTLADSST-SPNFDF-VGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVF 174
++ VG+ MF + + + DF G +++ +L D ++Q++ K +Q T ++F
Sbjct: 154 MIVVGVAMFLYKNKKGGAEDKDFGFGELLLIFSLAMDGTTTSIQDRIKKSYQRTGTSMMF 213
Query: 175 YSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICG 354
Y+ + +YL ++G L F + +P ++ ++ L+++ +G + +
Sbjct: 214 YTNLYSSLYLSAGLLVTGELWSFFYFVQRHP-YVFWDLTGLAIASCLGQWCIFKTIEEFS 272
Query: 355 ATVAVTVTTMRKALSIVISFLLFSKP 432
VTT RK +I+IS L + P
Sbjct: 273 PLTCSIVTTTRKLFTIIISVLFMNHP 298
>AF036696-3|ABB51190.1| 292|Caenorhabditis elegans Hypothetical
protein F15B10.1b protein.
Length = 292
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Frame = +1
Query: 67 VGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGF 246
+G+++++ ALL A++ Q++ +++ +E +F ++ I+ + +I+ S +++
Sbjct: 129 IGIIMLTFALLASAVLAIYQQQMYEKYGKHPDEAMFITHLISLPFFLIMG--SDIVSAAT 186
Query: 247 VYCTDNPSTMYG-------NVFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIV 405
P +++ ++ L Y ++ V L + V T+RK LS++
Sbjct: 187 KLSASAPHSVFPWLPSLWVDLIASCLLQYGCIKYVYQLNSRVDSLTVTLVVTLRKFLSLI 246
Query: 406 ISFLLFSKPFVFQYAWSGMLVVLA 477
+S + F PF Q+ W G ++V A
Sbjct: 247 VSIVYFKNPFTPQH-WLGAILVFA 269
>AF036696-2|AAB88349.1| 324|Caenorhabditis elegans Hypothetical
protein F15B10.1a protein.
Length = 324
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Frame = +1
Query: 67 VGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGF 246
+G+++++ ALL A++ Q++ +++ +E +F ++ I+ + +I+ S +++
Sbjct: 161 IGIIMLTFALLASAVLAIYQQQMYEKYGKHPDEAMFITHLISLPFFLIMG--SDIVSAAT 218
Query: 247 VYCTDNPSTMYG-------NVFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIV 405
P +++ ++ L Y ++ V L + V T+RK LS++
Sbjct: 219 KLSASAPHSVFPWLPSLWVDLIASCLLQYGCIKYVYQLNSRVDSLTVTLVVTLRKFLSLI 278
Query: 406 ISFLLFSKPFVFQYAWSGMLVVLA 477
+S + F PF Q+ W G ++V A
Sbjct: 279 VSIVYFKNPFTPQH-WLGAILVFA 301
>Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical
protein C53B4.6 protein.
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Frame = +1
Query: 67 VGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITG------MSG 228
VG+ ++S AL+ A +G QE ++ N E++FY + ++ + +
Sbjct: 163 VGLALLSFALILSAYLGLYQETFYQKHGKHNEEMMFYVHFLSIPLFAFVGDDMVPAFHAA 222
Query: 229 VLTDGFVYC---TDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALS 399
T FV T PS + +F + L + + V L + + V T+RK S
Sbjct: 223 YSTPSFVIAGLDTVVPSA-WVYIFAICLFQFACTKGVYMLSAVTTSLNVTMVLTLRKFFS 281
Query: 400 IVISFLLFSKPF 435
++ISF++F F
Sbjct: 282 LLISFIVFENVF 293
>U50135-3|AAA93454.1| 329|Caenorhabditis elegans Squashed vulva
protein 7 protein.
Length = 329
Score = 34.3 bits (75), Expect = 0.062
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Frame = +1
Query: 55 NFDFVGVVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVL 234
+FD +G +I + +C A +G ++ + ++FY+ + + + +G L
Sbjct: 152 SFDALGYTMIFINNICTAALGVYTKQKLDAKDLGKYGLMFYNCLFMLLPALCVVQYTGDL 211
Query: 235 TDGFVY-CTDNPSTMYGNVFLLS-LSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIVI 408
+ + +D+ ++ FLLS + G++ L L L + + T K L +
Sbjct: 212 DRAYSFMLSDSMTSSVWTCFLLSCICGFV-LNYSLVLCTHHNSALTTTCVGPIKNLFVTY 270
Query: 409 SFLLFSKPFVFQYA-WSGMLV-----VLAIYLNHYSKKHP-NYVPLPL 531
+ S +VFQ+A ++G+ V +L Y+ SK +Y PLP+
Sbjct: 271 VGMFSSGDYVFQWANFTGINVSVFGSILYTYVTFRSKSTTISYKPLPM 318
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 73 VVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGFVY 252
V VISL D I GN + K + + +N + + C+ +++ G+ V+ GF
Sbjct: 781 VTVISLIAYYDEIFGNSKSKILTIEKHIDNSFPWIYILLICIGSILLIGLFCVVAYGF-- 838
Query: 253 CTDNPSTMYGNVFL 294
T N Y N++L
Sbjct: 839 -TKNGRAKYTNLYL 851
>Z37092-8|CAA85460.2| 327|Caenorhabditis elegans Hypothetical
protein F44F4.7 protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 286 VFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGML 465
V + +SG M +Q+ L++ R+ + + MR AL + ++ P +F Y+W +
Sbjct: 104 VLAMGISGNMLIQSALSIDRLLATIFPFSYSRMR-ALPGFVLLIMVLIPAMFTYSWIRLD 162
Query: 466 VVLAIY 483
+VL Y
Sbjct: 163 IVLDDY 168
>Z19157-3|CAA79566.3| 395|Caenorhabditis elegans Hypothetical
protein ZC84.4 protein.
Length = 395
Score = 31.1 bits (67), Expect = 0.58
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 166 VVFYSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLL--SLSGYMGLQAVLTL 339
++FY +A+ L+ + M +L V+ T S+M +L+ S++ +M V +
Sbjct: 66 ILFYIFALCVGDLMTMIAML-LLVIELVFGTWQFSSMVCTSYLIFDSMNKFMAPMIVFLI 124
Query: 340 VRICGATVAVTVTTMRKALSIVISFLLFSKPFVF 441
R C +TV + T KA ++ + + F F F
Sbjct: 125 SRTCYSTVCLDKTRGEKAATLKYAIIQFCIAFAF 158
>AY037792-1|AAK94756.1| 327|Caenorhabditis elegans SRA-12 protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 286 VFLLSLSGYMGLQAVLTLVRICGATVAVTVTTMRKALSIVISFLLFSKPFVFQYAWSGML 465
V + +SG M +Q+ L++ R+ + + MR AL + ++ P +F Y+W +
Sbjct: 104 VLAMGISGNMLIQSALSIDRLLATIFPFSYSRMR-ALPGFVLLIMVLIPAMFTYSWIRLD 162
Query: 466 VVLAIY 483
+VL Y
Sbjct: 163 IVLDDY 168
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 29.5 bits (63), Expect = 1.8
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Frame = +1
Query: 13 GLTMFTLADSS-----TSPNFDFVGVVVISLALLCDAIIGNVQEKAMK-QFQATNNEVVF 174
G ++F L+ SS T F G+++++ LL DA N Q+ + + + +++F
Sbjct: 261 GASLFLLSSSSKGAGSTITYTSFSGMILMAGYLLFDAFTLNWQKALFDTKPKVSKYQMMF 320
Query: 175 YSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRICG 354
+ + + G L + ++ +VFLLSLSG +G + + + G
Sbjct: 321 GVNFFSAILCAVSLIEQGTLWSSIKFGAEHVD-FSRDVFLLSLSGAIGQIFIYSTIERFG 379
Query: 355 ATVAVTVTTMRK 390
V + T+R+
Sbjct: 380 PIVFAVIMTIRQ 391
>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
protein C01G10.1 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +1
Query: 73 VVVISLALLCDAIIGNVQEKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGFVY 252
+ + SL D I GN +K A +N++ + I C+ ++I+ G+ ++ GF
Sbjct: 774 ITISSLMTYFDEIFGN--KKLDIVTIAVDNQLSWIYIIIICIGVMILIGLICIVAYGF-- 829
Query: 253 CTDNPSTMYGNVFL 294
T N + Y N++L
Sbjct: 830 -TQNGRSKYTNLYL 842
>Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical
protein M162.3 protein.
Length = 347
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/89 (24%), Positives = 36/89 (40%)
Frame = +1
Query: 172 FYSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGYMGLQAVLTLVRIC 351
F YA + T +S VL GF C P+T Y +VF+ + + + +
Sbjct: 138 FRKYADVIEKKLAYTSISFVLFYGFYICWFTPTTAYNSVFMAWIPDPLSEEVP---SKEA 194
Query: 352 GATVAVTVTTMRKALSIVISFLLFSKPFV 438
A T+ + + F+LFS F+
Sbjct: 195 AAMYKHTILPWNNWIFVACMFILFSVYFI 223
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 321 ASCVNVGT-DMRCHRRRNGHHHEESSVNSY 407
AS +N+ T D H + NGHH +S N Y
Sbjct: 457 ASYINISTFDGYNHHQYNGHHERANSYNPY 486
>AC084158-29|AAL27264.2| 666|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 3 protein.
Length = 666
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 202 LVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLSGY-MGLQAVLTLVRICGATVAVTVT 378
L I+ ++ V+ G + DN S++ + L L L VLT V +
Sbjct: 503 LAILPTLAVVIFSGGI---DNISSLNDFLNCLQLIQLPFALIPVLTFVSDRNIMHEYKLA 559
Query: 379 TMRKALSIVISFLLFSKPFVFQYAWSG 459
++ K +SIVIS ++ F F Y+W G
Sbjct: 560 SVSKVVSIVISLIILFINFYFLYSWIG 586
>Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical
protein H25K10.7 protein.
Length = 405
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +1
Query: 7 CVGLTMFTLADSSTSPNFDFVGVVVISLALLCDAIIG--NVQEKAMKQF--QATNNEVVF 174
CV M T + + NF F + + L LC ++ ++ K ++NN+
Sbjct: 251 CVAFEMKTCVYTFFNNNFRFQIIPAVCLPFLCIVLVTCLRTARESRKNLSKSSSNNDRTI 310
Query: 175 YSYAIACVYLVIITGMSGV 231
Y I + V G SG+
Sbjct: 311 YMVTIMTAFSVFAEGPSGI 329
>U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 36 protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 397 SIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSKKHPNYVPL 525
SI++SF+ F + ++ G +VL IY+N + N V L
Sbjct: 245 SIIVSFISFVQTLIYTIYILGFFIVLNIYVNADGLFYGNNVAL 287
>AL023816-3|CAA19432.1| 296|Caenorhabditis elegans Hypothetical
protein T05G11.4 protein.
Length = 296
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 370 TVTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAIYLNHYSK 501
T+ +M+ + ISFL+ + P Y + LV + + L YS+
Sbjct: 194 TIRSMKLVTFMTISFLISTTPHGLMYVFGPFLVEIPVILMIYSR 237
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 127 EKAMKQFQATNNEVVFYSYAIACVYLV 207
EKA ++++ N+VVF+ + C Y +
Sbjct: 30 EKAYEEYERGMNQVVFHFFLCGCAYFI 56
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 127 EKAMKQFQATNNEVVFYSYAIACVYLV 207
EKA ++++ N+VVF+ + C Y +
Sbjct: 89 EKAYEEYERGMNQVVFHFFLCGCAYFI 115
>Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical
protein W03C9.6 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 373 VTTMRKALSIVISFLLFSKPFVFQYAWSGMLVVLAI 480
+ M LS+V L S F+ Y WSG VLA+
Sbjct: 286 IQKMNATLSVVTLTTLTSVIFMTNYGWSGAKTVLAM 321
>U40409-3|ABO16455.1| 681|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform b
protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 305 LKLSKNTLPYIVLGLSVQY 249
+KLS +TLPY++ GL + Y
Sbjct: 220 VKLSNHTLPYMIHGLGIPY 238
>U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform a
protein.
Length = 759
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 305 LKLSKNTLPYIVLGLSVQY 249
+KLS +TLPY++ GL + Y
Sbjct: 220 VKLSNHTLPYMIHGLGIPY 238
>U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform c
protein.
Length = 807
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 305 LKLSKNTLPYIVLGLSVQY 249
+KLS +TLPY++ GL + Y
Sbjct: 268 VKLSNHTLPYMIHGLGIPY 286
>U41995-2|AAA83460.1| 317|Caenorhabditis elegans Serpentine
receptor, class x protein46 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +1
Query: 127 EKAMKQFQATNNEVVFYSYAIACVYLVIITGMSGVLTDGFVYCTDNPSTMYGNVFLLSLS 306
E M + +N V F YAI C Y+ II + VL D FV C MY + S
Sbjct: 150 EMWMFLYHVSNQCVSFSFYAIFCKYISIIFII--VLIDVFVIC--KARFMYKKSKNDAKS 205
Query: 307 GYMGLQAVLTLVRIC 351
M + + LV+ C
Sbjct: 206 KQMNSKEICFLVQTC 220
>U23183-3|AAA64340.3| 496|Caenorhabditis elegans Hypothetical
protein K01A12.3 protein.
Length = 496
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 394 LSIVISFLLFSKPFVFQYAWSGMLVVL 474
L + +FL F KP+ F+Y LV+L
Sbjct: 296 LCTISTFLFFIKPYAFEYLSGWQLVIL 322
>AC006636-2|AAF39797.1| 325|Caenorhabditis elegans Hypothetical
protein F40C5.1 protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = -3
Query: 282 TIHSTRIIST---VHKSIREDPTHTGYYDKIYASD 187
T HST S + +REDP GY KIY D
Sbjct: 262 TAHSTHKSSNRYEAERQVREDPFVRGYLHKIYLFD 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,706,676
Number of Sequences: 27780
Number of extensions: 297151
Number of successful extensions: 837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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