Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E13
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 226 4e-59
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 226 4e-59
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 226 4e-59
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 221 1e-57
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 219 9e-57
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 35 0.28
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 35 0.28
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 35 0.28
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 35 0.28
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 35 0.28
AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein. 30 6.0
AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protei... 30 6.0
AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interactin... 30 6.0
AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protei... 30 6.0
AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interactin... 30 6.0
AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein. 30 6.0
AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein. 30 6.0
AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens ... 30 8.0
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 113 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 172
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 173 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 232
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 233 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 292
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 293 LPMHKMINTDLSRILKSPE 311
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 300 NTDLSRILKSPEIQRALRAPRKKIHR 325
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 226 bits (553), Expect = 4e-59
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 279 LPMHKMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 221 bits (541), Expect = 1e-57
Identities = 100/199 (50%), Positives = 130/199 (65%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH +GH +E++PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRRR+QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGII 218
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IW +SAF +LD L+G+W+ + K N+N
Sbjct: 219 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYN 278
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP +M T S + SP+
Sbjct: 279 LPMHEMINTDLSRILKSPE 297
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 286 NTDLSRILKSPEIQRALRAPRKKIHR 311
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 219 bits (534), Expect = 9e-57
Identities = 101/199 (50%), Positives = 130/199 (65%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 GRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKV 180
GRMFAPTK WRRWH ++GH +E+ PELPLVV DKV
Sbjct: 99 GRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKV 158
Query: 181 QEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRVQRKGPLIIYNKDKGLT 360
+ KTK+AV+ L+++KAW+D+ KVY SQR+RAGKGKMRNRR +QR+GP IIYN+D G+
Sbjct: 159 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGII 217
Query: 361 RAFRNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLFGSWKTPSKEKKNFN 540
+AFRNIPGI + APGGH+GRF IWT+SAF +LD L+G+W+ + K N+N
Sbjct: 218 KAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYN 277
Query: 541 LPQPKMA-TPTSAVC*SPK 594
LP KM T S + SP+
Sbjct: 278 LPMHKMINTDLSRILKSPE 296
Score = 39.5 bits (88), Expect = 0.010
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 561 NTDLSRLLKSEEIRKVLRAPNKRVVR 638
NTDLSR+LKS EI++ LRAP K++ R
Sbjct: 285 NTDLSRILKSPEIQRALRAPRKKIHR 310
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 34.7 bits (76), Expect = 0.28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 501 LVEDTIEGEEELQPAPAEDGNTDLSRLLKSEEIRKVLRAPNKRVV 635
L+ DT+E E + + AEDG + +K E++K PN+ ++
Sbjct: 865 LLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELI 909
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 34.7 bits (76), Expect = 0.28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 501 LVEDTIEGEEELQPAPAEDGNTDLSRLLKSEEIRKVLRAPNKRVV 635
L+ DT+E E + + AEDG + +K E++K PN+ ++
Sbjct: 822 LLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELI 866
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 34.7 bits (76), Expect = 0.28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 501 LVEDTIEGEEELQPAPAEDGNTDLSRLLKSEEIRKVLRAPNKRVV 635
L+ DT+E E + + AEDG + +K E++K PN+ ++
Sbjct: 865 LLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELI 909
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 34.7 bits (76), Expect = 0.28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 501 LVEDTIEGEEELQPAPAEDGNTDLSRLLKSEEIRKVLRAPNKRVV 635
L+ DT+E E + + AEDG + +K E++K PN+ ++
Sbjct: 822 LLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELI 866
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 34.7 bits (76), Expect = 0.28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 501 LVEDTIEGEEELQPAPAEDGNTDLSRLLKSEEIRKVLRAPNKRVV 635
L+ DT+E E + + AEDG + +K E++K PN+ ++
Sbjct: 889 LLLDTVESESDDEYFDAEDGEPQTCKSMKGSELKKAAEVPNEELI 933
>AY367050-1|AAR15506.1| 550|Homo sapiens NOEL1C protein.
Length = 550
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280969-1|AAQ18787.1| 504|Homo sapiens no Rab11-binding protein
1B protein.
Length = 504
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280968-1|AAQ18786.1| 1283|Homo sapiens Rab11-family interacting
protein 1B protein.
Length = 1283
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 832 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 885
>AY280967-1|AAQ18785.1| 504|Homo sapiens no Rab11-binding protein
1A protein.
Length = 504
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AY280966-1|AAQ18784.1| 612|Homo sapiens Rab11-family interacting
protein 1A protein.
Length = 612
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 161 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 214
>AK122583-1|BAC56924.1| 681|Homo sapiens FLJ00294 protein protein.
Length = 681
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 230 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 283
>AK090437-1|BAC03418.1| 469|Homo sapiens FLJ00355 protein protein.
Length = 469
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 SSCPTQRTPYHL**GQGSDSCIPQHPWHRDAQREQAEPPEAGT-RRPSRQVHHL 461
SSCP + P G SD P+ P D++RE P T P+ HL
Sbjct: 80 SSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHL 133
>AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90562 fis, clone OVARC1001163. ).
Length = 265
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 351 GSDSCIPQHPWHRDAQREQAEPPEAGTRRPSRQVHHL--DQVRFR 479
G + HP D +REQA AG R P ++HHL D VR R
Sbjct: 127 GHPGAVRGHPGGGDQRREQAGGWHAGRRLP--ELHHLRGDAVRLR 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,537,357
Number of Sequences: 237096
Number of extensions: 1689814
Number of successful extensions: 5705
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5688
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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