Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E12
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    31   0.38 
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   2.0  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    27   6.1  
U46671-2|AAA85748.1|  205|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 298 LQPLEWHWIMLTGHGISSSGIPH 366
           + P EWH + + G+G S  G+P+
Sbjct: 267 MTPAEWHSVAIVGYGTSDDGVPY 289


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDFTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDFTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 78  RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 179
           R L+ +EP+ +  +Y+   LLTSS + R    +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704


>U46671-2|AAA85748.1|  205|Caenorhabditis elegans Hypothetical
           protein C14E2.3 protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 404 FAGSCHLSPNPGMC 363
           F G CH  PNP +C
Sbjct: 4   FQGQCHSQPNPAIC 17


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,086,750
Number of Sequences: 27780
Number of extensions: 194143
Number of successful extensions: 526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)