Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E08
(596 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 113 2e-25
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 112 3e-25
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 111 7e-25
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 111 7e-25
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 111 9e-25
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 110 1e-24
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 110 1e-24
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 110 2e-24
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 109 3e-24
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 107 9e-24
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 107 1e-23
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 106 2e-23
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 106 2e-23
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 106 3e-23
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 103 2e-22
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 102 3e-22
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 96 3e-20
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 94 1e-19
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 94 1e-19
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 93 2e-19
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 93 3e-19
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 91 1e-18
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 89 4e-18
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 89 4e-18
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 89 4e-18
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 89 4e-18
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 89 4e-18
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 89 4e-18
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 87 1e-17
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 85 5e-17
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 85 5e-17
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 73 4e-13
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 113 bits (271), Expect = 2e-25
Identities = 69/197 (35%), Positives = 110/197 (55%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
PK ++++ +LG+ FYRKFIPN A + P+ L K + + E +SFE K
Sbjct: 509 PKTPKQIKSFLGLCGFYRKFIPNFAKIVKPMTLKLK----KGAIIDTKCKEYIESFEKLK 564
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ + +L +P+ ++ TDAS+ AIGAVL Q P+ + S+ LN + Y+
Sbjct: 565 VLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQNHK----PVCYASRTLNEHEINYAT 620
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++ELLAI + KYFR + +PF V +DHKP+ + N + + + R+ +++F
Sbjct: 621 IEKELLAIVWATKYFRSYLFGRPFEVLSDHKPL--VWLNNIKEPNMKLQRWKIKLNEFDY 678
Query: 546 DIRYIAGDHNHVADALS 596
I+Y+ G NHVADALS
Sbjct: 679 KIKYLPGKENHVADALS 695
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 112 bits (270), Expect = 3e-25
Identities = 69/198 (34%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWT-PELEKSFEDS 182
P +E++ +LG+ +YRKFIPN A + P+ +CLK I T PE + +F+
Sbjct: 436 PTKPKEIKAFLGLTGYYRKFIPNFADIAKPMT-----KCLKKNMKIDTTNPEYDSAFKKL 490
Query: 183 KSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 362
K ++ +L P+ + TDASD A+GAVL Q PL + S+ LN + YS
Sbjct: 491 KYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGH----PLSYISRTLNEHEINYS 546
Query: 363 PYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFT 542
++ELLAI + K FR + + F + +DH+P++ ++ + + R+ +S+F
Sbjct: 547 TIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDP--NSKLTRWRVKLSEFD 604
Query: 543 TDIRYIAGDHNHVADALS 596
DI+YI G N VADALS
Sbjct: 605 FDIKYIKGKENCVADALS 622
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 111 bits (267), Expect = 7e-25
Identities = 68/197 (34%), Positives = 100/197 (50%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N A + + C K WT E +K+F K
Sbjct: 544 PHDADSARRFVAFCNYYRRFIKNFADYSRHITRL----C-KKNVPFEWTDECQKAFIHLK 598
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
S L N TLL +P+ I TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 599 SQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKST 658
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +FR + K FTV TDH+P+T F + S + R + ++
Sbjct: 659 TEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNP--SSKLTRIRLELEEYNF 716
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G NHVADALS
Sbjct: 717 TVEYLKGKDNHVADALS 733
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 111 bits (267), Expect = 7e-25
Identities = 68/197 (34%), Positives = 100/197 (50%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N A + + C K WT E +K+F K
Sbjct: 307 PHDADSARRFVAFCNYYRRFIKNFADYSRHITRL----C-KKNVPFEWTDECQKAFIHLK 361
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
S L N TLL +P+ I TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 362 SQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKST 421
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +FR + K FTV TDH+P+T F + S + R + ++
Sbjct: 422 TEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNP--SSKLTRIRLELEEYNF 479
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G NHVADALS
Sbjct: 480 TVEYLKGKDNHVADALS 496
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 111 bits (266), Expect = 9e-25
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 1/198 (0%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISW-TPELEKSFEDS 182
P +E++ +LG+ FYRKFIP+ A + PL CLK + PE ++F+
Sbjct: 383 PTKPKEIKSFLGLTGFYRKFIPHFAQIAKPLTT-----CLKKDKKVDIKNPEYIEAFKRL 437
Query: 183 KSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 362
K ++N +L P+ + + TDAS+ A+GAVL Q P+ + S+ LN+ + YS
Sbjct: 438 KLLISNDPILRSPDFKKKFVLTTDASNVALGAVLSQDGH----PISYISRTLNDHETNYS 493
Query: 363 PYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFT 542
++ELLAI + K FR + + F + +DH+P+ K +++ ++++
Sbjct: 494 TIEKELLAIVWATKTFRHYLLGRHFEIASDHQPLCWLHKMKEPNAKLTRWKFR--LAEYD 551
Query: 543 TDIRYIAGDHNHVADALS 596
DI+Y+ G NHVADALS
Sbjct: 552 FDIKYVKGKENHVADALS 569
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 110 bits (265), Expect = 1e-24
Identities = 67/197 (34%), Positives = 110/197 (55%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P N R ++ +LG+L +YRKFI + A + P+ L G+ + TT + +FE K
Sbjct: 545 PTNRRAIKSFLGLLGYYRKFIRDFARITKPMTKQLKGK-RQVTT----DKDFVDAFEQCK 599
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ L+N +L HP+ + TDAS+ A+GAVL Q S P+ F S+ L++ + YS
Sbjct: 600 TLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQNDRPVCFASRTLSDTEVNYST 659
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++E+LAI ++KYFR + FT+ TDHKP+ + N + + + R+ + ++
Sbjct: 660 IEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPL--IWLMNFKEPNSKIIRWRLQLMEYNF 717
Query: 546 DIRYIAGDHNHVADALS 596
+I + G N +ADALS
Sbjct: 718 EIIHKKGSQNVIADALS 734
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 110 bits (265), Expect = 1e-24
Identities = 66/205 (32%), Positives = 117/205 (57%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P+ ++ELR +LG+ +YR+FIPN A + PL ++L G+ L + +S E +
Sbjct: 424 PRTLKELRSFLGLSGYYRRFIPNYAKLAKPLSSLLRGEDGRISRTLSSKKSVSLNREAIE 483
Query: 168 SFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ KS L + ++ H P+ + + TDAS+ A+GAVL Q++ P+ F S+ L+
Sbjct: 484 AFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR----PISFLSRTLSK 539
Query: 345 AQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
A+ Y+ ++E+LAI ++K + ++ +FTDH+P+T + +S + R R+
Sbjct: 540 AEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSL--SSWNGNARIKRWK 597
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
++ ++ +I Y G N VADALS
Sbjct: 598 AYLEEYDYEIFYKPGRENTVADALS 622
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 110 bits (264), Expect = 2e-24
Identities = 66/197 (33%), Positives = 111/197 (56%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
PK+ +E++ +LG+ FYRKFIPN A + P+ L K + + + +FE K
Sbjct: 424 PKSTKEIKSFLGLCGFYRKFIPNFAKIAKPMTLRLK----KGSIINIKDSDYYLAFEKLK 479
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ + +L HP+ + ++ TDAS+ AIGAVL Q+ P+ + S+ LN + YS
Sbjct: 480 VLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEHK----PICYASRTLNEHEVNYSA 535
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++ELLAI + KYFR + + F + +DH+P+ + + + + + R+ +++F
Sbjct: 536 IEKELLAIVWATKYFRSYLFGRKFEIHSDHRPL--VWLDSIKEPNMKLQRWKIKLNEFDY 593
Query: 546 DIRYIAGDHNHVADALS 596
I+Y+ G NHVADALS
Sbjct: 594 HIKYLPGKENHVADALS 610
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 109 bits (262), Expect = 3e-24
Identities = 66/197 (33%), Positives = 112/197 (56%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + + ++ +LG+L +YRKFI + A + P+ L G + +I E +K+FE K
Sbjct: 431 PHSKKSIKSFLGLLGYYRKFIRDFARLTQPMTQKLRGN--NKSIIID--DEFKKAFEYCK 486
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ L+N +L +P+ + TDAS+ AIGAVL Q P+ F S+ L+ A+ YS
Sbjct: 487 TLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSDRPVCFASRTLSAAETNYST 546
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++E+LAI +++YFR + + FT+ TDHKP+T + N + + + R+ + ++
Sbjct: 547 IEKEMLAIIWAVQYFRPYLFGRRFTIITDHKPLT--WLMNFKQPNSKIVRWRLQLQEYDF 604
Query: 546 DIRYIAGDHNHVADALS 596
++ Y G N +ADALS
Sbjct: 605 EVVYKKGSQNVIADALS 621
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 107 bits (258), Expect = 9e-24
Identities = 64/197 (32%), Positives = 100/197 (50%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N A + + C K W+ E + +FE K
Sbjct: 133 PHDADSARRFVAFCNYYRRFIRNFADYSRHITRL----C-KKNVPFEWSSECQNAFEYLK 187
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
L + TLL +P+ R I+TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 188 ENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKGESNKST 247
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +FR + K FT+ TDH+P+T F + S + R + ++
Sbjct: 248 TEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNP--SSKLTRMRLELEEYDF 305
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G N VADALS
Sbjct: 306 TVEYLRGKDNFVADALS 322
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 107 bits (256), Expect = 1e-23
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSG------QCLKATTLISWTPELEK 167
P +++EL+R+LGM ++YRKFI + A V PL N+ G + I+ +
Sbjct: 352 PTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQ 411
Query: 168 SFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 347
SF D KS L ++ +LA P + TDAS+ AIGAVL Q P+ + S+ LN
Sbjct: 412 SFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKT 471
Query: 348 QRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLD 524
+ Y+ ++E+LAI S+ R ++ V+TDH+P+T F + + + R+
Sbjct: 472 EENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLT--FALGNRNFNAKLKRWKA 529
Query: 525 FISQFTTDIRYIAGDHNHVADALS 596
I ++ ++ Y G N VADALS
Sbjct: 530 RIEEYNCELIYKPGKSNVVADALS 553
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p protein.
Length = 825
Score = 106 bits (255), Expect = 2e-23
Identities = 64/197 (32%), Positives = 100/197 (50%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N A + + C K WT + + +FE K
Sbjct: 438 PTDADSARRFVAFCNYYRRFIQNFADYSRHITRL----C-KKNVKFEWTADCQHAFEHLK 492
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
L N TLL +P+ I+TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 493 KQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQNYNGIHLPVAYASRSFTKGESNKST 552
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +F+ + + FTV TDH+P+T F + R LD + ++
Sbjct: 553 TEQELSAIHWAINHFKPYIYGRHFTVKTDHRPLTYLFSMVNPSSKLTRMR-LD-LEEYEF 610
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G N+VADALS
Sbjct: 611 TVEYLKGKDNYVADALS 627
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 106 bits (255), Expect = 2e-23
Identities = 64/197 (32%), Positives = 99/197 (50%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N A + + C K W+ E + +FE K
Sbjct: 133 PHDADSARRFVAFCNYYRRFIRNFADYSRHITRL----C-KKNVPFEWSSEYQNAFEYLK 187
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
L TLL +P+ R I+TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 188 ENLMYPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKGESNKST 247
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +FR + K FT+ TDH+P+T F + S + R + ++
Sbjct: 248 TEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNP--SSKLTRMRLELEEYDF 305
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G N VADALS
Sbjct: 306 TVEYLRGKDNFVADALS 322
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 106 bits (254), Expect = 3e-23
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 2/199 (1%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELE--KSFED 179
P +E+R +LG+ +YRKFIPN A + P+ + CLK T I T +LE ++FE
Sbjct: 435 PTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTS-----CLKKRTKID-TQKLEYIEAFEK 488
Query: 180 SKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKY 359
K+ + +L P+ + TDAS+ A+GAVL Q P+ F S+ LN+ + Y
Sbjct: 489 LKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGH----PISFISRTLNDHELNY 544
Query: 360 SPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQF 539
S ++ELLAI + K FR + + F + +DH+P+ + N + + R+ +S++
Sbjct: 545 SAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPL--RWLHNLKEPGAKLERWRVRLSEY 602
Query: 540 TTDIRYIAGDHNHVADALS 596
I YI G N VADALS
Sbjct: 603 QFKIDYIKGKENSVADALS 621
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 103 bits (246), Expect = 2e-22
Identities = 64/197 (32%), Positives = 103/197 (52%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P +E++ +LG+ +YRKFIPN + + PL L K + + E ++F+ K
Sbjct: 398 PSKPKEIKAFLGITGYYRKFIPNFSDIAKPLTKCLK----KGVKIDTKHKEYIEAFQKLK 453
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
++ +L PN + TDAS+ A+GAVL Q P+ + S+ LN + YS
Sbjct: 454 LLISEDPILKIPNFERKFVLTTDASNVALGAVLSQDGH----PISYISRTLNEHEVNYSA 509
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++ELLAI + K FR + + + +DH+P+ K + + R+ +S++
Sbjct: 510 IEKELLAIVWATKTFRHYLLGRHCEIASDHQPLCWLHKLKEP--NSKLTRWKIRLSEYDF 567
Query: 546 DIRYIAGDHNHVADALS 596
DI+YI G NHVADALS
Sbjct: 568 DIKYIKGKENHVADALS 584
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 102 bits (245), Expect = 3e-22
Identities = 63/197 (31%), Positives = 97/197 (49%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P + RR++ N+YR+FI N + L + C K WT E +FE K
Sbjct: 299 PTDADSARRFVAFCNYYRRFIKNFSDHSRHLTRL----C-KKNVQFEWTAECNDAFEYLK 353
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ L TLL +P+ I TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 354 TELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQDHNGQQLPVAYASRMFTQGESNKST 413
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++EL AI+ +I +FR + K F V +DH+P++ F + R LD + ++
Sbjct: 414 TEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLFSMKNPSSKLTRMR-LD-LEEYDF 471
Query: 546 DIRYIAGDHNHVADALS 596
+ Y+ G NH+ADALS
Sbjct: 472 TVEYLKGKDNHIADALS 488
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 96.3 bits (229), Expect = 3e-20
Identities = 53/162 (32%), Positives = 95/162 (58%), Gaps = 8/162 (4%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P+ ++ELR +LG+ +YR+FIPN A + PL ++L G+ L + +S E +
Sbjct: 268 PRTLKELRSFLGLSGYYRRFIPNYAKLAKPLSSLLRGEDGRISRTLSSKKSVSLNREAIE 327
Query: 168 SFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ KS L + ++ H P+ + + TDAS+ A+GAVL Q++ P+ F S+ L+
Sbjct: 328 AFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR----PISFLSRTLSK 383
Query: 345 AQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPIT 467
A+ Y+ ++E+LAI ++K + ++ +FTDH+P+T
Sbjct: 384 AEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLT 425
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 94.3 bits (224), Expect = 1e-19
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
PKN+ E+R +LG+ ++YR FI + A + P+ +IL G+ + + ++ ++
Sbjct: 388 PKNVFEVRSFLGLASYYRCFIKDFASIARPISDILKGENGSVSRHRSRSIQVEFSEAQQR 447
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+FE ++ LA+ +L +P+ + + TDAS IGAVL Q+ P+ S+ L++
Sbjct: 448 AFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGR----PITMISRTLSD 503
Query: 345 AQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
+ Y+ +RELLAI ++ R ++ +K +FTDH+P+T A +++ + R+
Sbjct: 504 REVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPLTFAVSESNPNAKIK--RWK 561
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
I + I Y G +N VADALS
Sbjct: 562 ARIDESGARIFYKPGRNNLVADALS 586
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 93.9 bits (223), Expect = 1e-19
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Frame = +3
Query: 3 RPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTL------ISWTPELE 164
+P N+ +R +LG+ ++YR FI + A + PL +IL G+ K + IS+
Sbjct: 416 QPTNLFSVRSFLGLASYYRCFIKDFASIARPLTDILKGENGKVSASQSKKIPISFDERQC 475
Query: 165 KSFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLN 341
+FE K+ L + +L +P+ R + TDAS +GAVL Q P+ S+ L
Sbjct: 476 SAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLSQDGK----PVTMISRTLQ 531
Query: 342 NAQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRY 518
+ + ++ +RELLAI ++K R ++ +K +FTDH+P+T A + + R+
Sbjct: 532 DRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYAVSDRNPNAKIK--RW 589
Query: 519 LDFISQFTTDIRYIAGDHNHVADALS 596
FI + I Y G +VADALS
Sbjct: 590 KAFIDEHNAKIFYKPGKETYVADALS 615
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 93.5 bits (222), Expect = 2e-19
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P N+ ++ +LG+ +++R+FI + + + PLH+IL K + E F K
Sbjct: 941 PNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDIL-----KKDKPFKFGSEEMICFNMLK 995
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVL-QQKSDSGWVPLGFFSKKLNNAQRKYS 362
L + +LA N + + DAS S GAVL Q+K D W P+ FFSK+ + + KY
Sbjct: 996 DKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDIESKYH 1055
Query: 363 PYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFT 542
++ E LAI S++ FR + + F + TD + K + +PR R+ +
Sbjct: 1056 SFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKK--ELNPRIARWALEFQGYD 1113
Query: 543 TDIRYIAGDHNHVADALS 596
+I + AG DALS
Sbjct: 1114 FEIVHRAGSRMQHVDALS 1131
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 93.1 bits (221), Expect = 3e-19
Identities = 55/197 (27%), Positives = 107/197 (54%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P N ++++ +LG+ + R++I + + + PL L K + + + ++F+ K
Sbjct: 361 PTNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLK----KNSKINTHDQXYVEAFQKLK 416
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ + ++ +P+ I+TDAS+ A+GAVL Q + + + S+ L N + YS
Sbjct: 417 ILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKV----ISYASRSLKNHELNYST 472
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
++ELLAIY S K+F++ + + F + TDH+P+ + N + + + R+ +++F
Sbjct: 473 IEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPL--VWLNNLKEPNLKLQRWKVQLNEFDF 530
Query: 546 DIRYIAGDHNHVADALS 596
DI +I G N +AD LS
Sbjct: 531 DITFIKGKENALADGLS 547
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 90.6 bits (215), Expect = 1e-18
Identities = 52/197 (26%), Positives = 104/197 (52%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P+ + +R+++G+ +++RKF+ + + PL+++ SG + I+W+ ELE+
Sbjct: 670 PQTVSGVRQFIGLASYFRKFVSGFSQLMKPLYSLSSG-----SGKITWSAELEEIRLKVV 724
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
+ L N L +P+ + + TDAS GA+L + +S + +FSK + + +Y
Sbjct: 725 TILTNEPALVIFDPQYPIELHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHS 784
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTT 545
Y+ E LA+ +++K+FR + + F V+TD + ++ + +PR R+ ++ F
Sbjct: 785 YELETLAVVKAVKHFRHYLIGREFVVYTDCNSLKAS--RTKIDLTPRVHRWWAYLQSFNF 842
Query: 546 DIRYIAGDHNHVADALS 596
+I+Y G D LS
Sbjct: 843 EIQYREGKRMAHVDFLS 859
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 386 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 445
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALS 584
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 421 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 480
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 536
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 537 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 594
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 595 SYIDQHNAKVFYKPGKENFVADALS 619
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 421 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 480
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 536
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 537 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 594
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 595 SYIDQHNAKVFYKPGKENFVADALS 619
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 386 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 445
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALS 584
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 386 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 445
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALS 584
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 89.0 bits (211), Expect = 4e-18
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 839 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 898
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 899 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 954
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 955 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 1012
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 1013 SYIDQHNAKVFYKPGKENFVADALS 1037
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 87.4 bits (207), Expect = 1e-17
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEK 167
P + ++R +LG+ ++YR FI + A + P+ +IL G+ + + +
Sbjct: 391 PDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRN 450
Query: 168 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 344
+F+ ++ LA+ +L +P + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 451 AFQRLRNILASEDVILKYPVFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 506
Query: 345 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYL 521
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 507 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 564
Query: 522 DFISQFTTDIRYIAGDHNHVADALS 596
+I Q + Y G N VADALS
Sbjct: 565 SYIDQHNAKVFYKPGKENFVADALS 589
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 85.4 bits (202), Expect = 5e-17
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P+N++ ++ +LG+ F+RKFIP A + PL ++L K + + P ++S K
Sbjct: 713 PQNVKAVQGFLGLTGFFRKFIPGYAQIARPLTDLL-----KKDAIFNIGPVEQQSVNKLK 767
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
L N +L + A + TDAS +GAVL QK + + P+ F+S+K A+
Sbjct: 768 EILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRHS 827
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCS-PRXF-RYLDFISQF 539
Y E+ A Y ++K FR + PF + TD AFK+ + K PR ++ ++ F
Sbjct: 828 YYLEVKAAYLALKKFRHYLLGVPFKLVTD----CVAFKQTTKKADVPREVGPWILYMQDF 883
Query: 540 TTDIRYIAGDHNHVADALS 596
+ AG+ D LS
Sbjct: 884 NFQPEHRAGERMRHVDFLS 902
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 85.4 bits (202), Expect = 5e-17
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Frame = +3
Query: 6 PKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSK 185
P+N++ ++ +LG+ F+RKFIP A + PL ++L K + + P ++S K
Sbjct: 407 PQNVKAVQGFLGLTGFFRKFIPGYAQIARPLTDLL-----KKDAIFNIGPVEQQSVNKLK 461
Query: 186 SGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSP 365
L N +L + A + TDAS +GAVL QK + + P+ F+S+K A+
Sbjct: 462 EILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRHS 521
Query: 366 YDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNSDKCS-PRXF-RYLDFISQF 539
Y E+ A Y ++K FR + PF + TD AFK+ + K PR ++ ++ F
Sbjct: 522 YYLEVKAAYLALKKFRHYLLGVPFKLVTD----CVAFKQTTKKADVPREVGPWILYMQDF 577
Query: 540 TTDIRYIAGDHNHVADALS 596
+ AG+ D LS
Sbjct: 578 NFQPEHRAGERMRHVDFLS 596
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 72.5 bits (170), Expect = 4e-13
Identities = 42/118 (35%), Positives = 63/118 (53%)
Frame = +3
Query: 243 IMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMV 422
I TDAS A GAVL Q + +P+ + S+ + S ++EL AI+ +I +FR V
Sbjct: 5 ITTDASKQACGAVLSQDHNGQQLPVAYASRSFTKGESNKSTTEQELAAIHWAINHFRPYV 64
Query: 423 ELKPFTVFTDHKPITSAFKKNSDKCSPRXFRYLDFISQFTTDIRYIAGDHNHVADALS 596
+ F V +DH+P++ F + R LD + +F + Y+ G NHVADALS
Sbjct: 65 YGRHFLVQSDHRPLSYLFSMRNPSSKLTRMR-LD-LEEFEFTVEYLKGKDNHVADALS 120
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,821,062
Number of Sequences: 53049
Number of extensions: 467761
Number of successful extensions: 1318
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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