Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E08
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   4.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.2  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 73  MQPMYKLLCIISYQDNVLRL 132
           +QP++KL C  ++ + V+ L
Sbjct: 41  LQPLFKLACTDTFMEGVIVL 60


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/55 (21%), Positives = 24/55 (43%)
 Frame = +3

Query: 240 AIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIK 404
           A+M       +  V +Q  D+   P G    KL NA+ + +     L+ +  +++
Sbjct: 249 AVMNMTGAGYVWIVTEQALDASNAPEGLLGLKLINAENETAHIKDSLIVLTSALQ 303



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +3

Query: 351 RKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKNS 488
           R   PY  +     E +K+F +M  +   +  TD + +   F+  S
Sbjct: 146 RTVPPYSHQTDVWVELLKHFNYMKVIFIHSSDTDGRALLGRFQTTS 191


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 360 SPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAFKKN 485
           +P D+ L+    S     + + + P T   DHKP+   F+ N
Sbjct: 347 NPTDKMLVQDISSPDAVEYGI-IGPTTCMGDHKPVFLEFRMN 387


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 105 ILSGQCLKATTLISWTPELEKSFEDSKSGLANATLL 212
           + SG C     L++  P LE +FE+  S +    +L
Sbjct: 241 VCSGNCKLNDILLTVRPHLELTFENILSHINTVYVL 276


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 105 ILSGQCLKATTLISWTPELEKSFEDSKSGLANATLL 212
           + SG C     L++  P LE +FE+  S +    +L
Sbjct: 241 VCSGNCKLNDILLTVRPHLELTFENILSHINTVYVL 276


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 532  HNSLQT*DTSQAIIIMWLTP 591
            H++  T  TSQ I I W++P
Sbjct: 1086 HDTTCTTLTSQTIRISWMSP 1105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,738
Number of Sequences: 438
Number of extensions: 3413
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)