Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E07
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   2e-05
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 205 NLVINNRQLCAR-KDSSKGDSGGPLMYQVGSTFEVV--GVLSYGMRASGRSNVPNVYTNV 375
           N+++N     A+ KD+ + DSGGP+++Q   T  +V  G++S+G         PN  T V
Sbjct: 329 NIMVNAMCAYAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAEC---GKYPNGNTKV 385

Query: 376 YEYIPWITS 402
             YI WI S
Sbjct: 386 GSYIDWIVS 394


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 334  ASGRSNVPNVYTNVYEYIPWITSTIEA*EMAARPIKQNYNLIKN 465
            AS  SNV NV TN+   +P +    +     ++  +Q   ++ N
Sbjct: 950  ASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQQQQQQQTIVTN 993


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 286 LDTSAVHRNRLWTNLYGR 233
           ++ +A+H N  +++LYGR
Sbjct: 591 INQAAIHYNLPYSSLYGR 608


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 301 EVVGVLSYGMRASGRSNVPNVYTNVYEYIPWI 396
           EV+G  S G  A  R  VP+   ++   + W+
Sbjct: 137 EVIGGASRGCTAVLRCVVPSFVKDLVRVVSWL 168


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 301 EVVGVLSYGMRASGRSNVPNVYTNVYEYIPWI 396
           EV+G  S G  A  R  VP+   ++   + W+
Sbjct: 137 EVIGGASRGCTAVLRCVVPSFVKDLVRVVSWL 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,679
Number of Sequences: 438
Number of extensions: 3334
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)