Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_E03
         (549 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M15205-1|AAA61191.1|  234|Homo sapiens protein ( Human thymidine...    30   6.1  
K02581-1|AAA61187.1|  234|Homo sapiens TK2 protein.                    30   6.1  
BT006941-1|AAP35587.1|  234|Homo sapiens thymidine kinase 1, sol...    30   6.1  
BC007986-1|AAH07986.1|  234|Homo sapiens TK1 protein protein.          30   6.1  
BC007872-1|AAH07872.1|  234|Homo sapiens thymidine kinase 1, sol...    30   6.1  
BC006484-1|AAH06484.1|  234|Homo sapiens thymidine kinase 1, sol...    30   6.1  

>M15205-1|AAA61191.1|  234|Homo sapiens protein ( Human thymidine
           kinase gene, complete cds, with clustered Alu repeats in
           the introns. ).
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


>K02581-1|AAA61187.1|  234|Homo sapiens TK2 protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


>BT006941-1|AAP35587.1|  234|Homo sapiens thymidine kinase 1,
           soluble protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


>BC007986-1|AAH07986.1|  234|Homo sapiens TK1 protein protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


>BC007872-1|AAH07872.1|  234|Homo sapiens thymidine kinase 1,
           soluble protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


>BC006484-1|AAH06484.1|  234|Homo sapiens thymidine kinase 1,
           soluble protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 FHALCRLCLNKSSFGTSIFGAAPDDETNISITSKIAECLELR 384
           +H++CRLC  K + G     A PD++ N  +  K  E +  R
Sbjct: 181 YHSVCRLCYFKKASGQP---AGPDNKENCPVPGKPGEAVAAR 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,013,821
Number of Sequences: 237096
Number of extensions: 1523756
Number of successful extensions: 2748
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2748
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)