BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_E02
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 48 2e-06
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.091
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 33 0.091
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 31 0.28
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 30 0.85
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 29 1.1
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 29 2.0
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 29 2.0
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 3.4
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 27 4.5
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 4.5
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 48.4 bits (110), Expect = 2e-06
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQ----NADAAINYWIQNGAPTHKLV 170
D + + ++D++ + + +P+YA P + N D++ YW Q G P K++
Sbjct: 240 DFILLMSYDFFGAWASL--VGFNSPLYATTEL-PAEWNGWNVDSSARYWNQKGMPKEKII 296
Query: 171 LGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAKLIN 329
+G+ T GR W L++ S I+ P + + Y + G+ +Y E C L N
Sbjct: 297 VGMPTYGRGWTLNNASAIN---PGTSGSPAKITQYVQEAGVGAYFEFCEMLAN 346
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.091
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 3 DIVNIQAFDYYTPER--NPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLG 176
D +N+ + YY P N K AP+Y NR+ N D + Y I KL +
Sbjct: 274 DFLNVLTYGYYAPWSGVNGKFVGPNAPLYGG-NRE---NVDETMQYLICKTRTPSKLNMA 329
Query: 177 ISTTGRTWKLDSDS 218
+S GR W+ +D+
Sbjct: 330 LSFYGRYWENVNDN 343
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 33.1 bits (72), Expect = 0.091
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNPKEADYT---APIY--APQNRDPLQNADAAINYWIQNGAPTHKL 167
D +N+ +DYY + K YT AP+Y + + NAD ++ ++ N +L
Sbjct: 1142 DFINVMTYDYYGAWES-KWGAYTGTPAPLYFGSLKGFSGKLNADFSMKFYACNTKKPSQL 1200
Query: 168 VLGISTTGRTWK 203
+G+ GR WK
Sbjct: 1201 TMGVPFYGRYWK 1212
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 31.5 bits (68), Expect = 0.28
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNP--KEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLG 176
D N+ + DYY P N K +P+Y P N D + Y+ + KL +
Sbjct: 220 DFFNVHSMDYYGPWPNEWGKPTGPISPLYGPTR----HNVDWTLRYYAEKTGEPGKLNMV 275
Query: 177 ISTTGRTWK 203
I R WK
Sbjct: 276 IPFFVRLWK 284
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 0.64
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNP--KEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLG 176
D VN+ + DY P N +AP+Y + N D I +I+N K L
Sbjct: 116 DFVNVYSMDYAGPWDNQWGTPTGPSAPLYGGLDARRNFNVDYTIKSYIRNIRRPEKFNLA 175
Query: 177 ISTTGRTWKLDSDSEISGV 233
I + R W+ D+ G+
Sbjct: 176 IPFSVRLWRNVEDAIQPGI 194
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 29.9 bits (64), Expect = 0.85
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNP--KEADYTAPIY-APQNRDPLQNADAAINYWIQNGAPTHKLVL 173
D +NI + DYY P +NP +PIY Q R+ +A+ Y + + K +
Sbjct: 249 DFINIYSMDYYGPWKNPYGNPTGPISPIYNGAQGREAYNVHSSALTYSCK-VKQSKKFNI 307
Query: 174 GISTTGRTWK 203
I R WK
Sbjct: 308 VIPFFARLWK 317
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNPKEADYT---APIY--APQNRDPLQNADAAINYWIQNGAPTHKL 167
D +N+ +DYY + K YT AP+Y + + NAD ++ ++ +L
Sbjct: 1679 DFINVMTYDYYGAWES-KWGAYTGTPAPLYFGSLKGFSGKLNADFSMKFYACKTEKPSQL 1737
Query: 168 VLGISTTGRTWK 203
+G+ GR WK
Sbjct: 1738 NMGVPFYGRYWK 1749
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 28.7 bits (61), Expect = 2.0
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +3
Query: 6 IVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGIST 185
IV ++ + PER E AP + N L +A NY QN PT +LGI+
Sbjct: 178 IVKVEGEFWLCPERPEIENHKQAPYFGAANM-LLTHAKIYRNY-DQNYKPTQHGILGITN 235
Query: 186 TGRTWKLDSDSE 221
GR +DS+
Sbjct: 236 GGRFCFPATDSQ 247
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3
Query: 3 DIVNIQAFDYYTPER--NPKEADYTAPIYAPQNRDPL---QNADAAINYWIQNGAPTHKL 167
D+V I +D++ R NP + AP++ + + NA+A++ W G P +
Sbjct: 84 DMVQIMNYDFHVFNRYSNPF-VGFNAPLHPMRAEISVLGEMNAEASMKTWYDLGLPRNIS 142
Query: 168 VLGISTTGRTWKL 206
GI T R ++L
Sbjct: 143 FFGIPTYARAFQL 155
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.9 bits (59), Expect = 3.4
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +3
Query: 21 AFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTW 200
A D P R P A P AP N++ + + + W Q T K+ + +T T
Sbjct: 703 AVDAAAPPRPPPAARPPPPRPAPANKEKPKEPEPEEDAWAQFKRMTEKVSTAVKSTESTL 762
Query: 201 K-LDSDSEISGV--PPIHADXGGEAG 269
K L+ S + + A+ GG G
Sbjct: 763 KNLEETSAANDIKDESYLANVGGSQG 788
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 144 FESSNL*QRRRFVEDRGSAV-RKSVQCSPPLWGYVQVYNSQ 25
F + N R+ + R SAV K +PP GY Q Y Q
Sbjct: 81 FSNQNENDRKMMEDPRESAVPNKRAAAAPPWIGYTQTYQGQ 121
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 83 RTAEPRSSTKRRRCYKLLDSKWCAYPQTCPWY 178
RT +S + RRRC + +C CP+Y
Sbjct: 199 RTPPYKSRSSRRRCKDFEERGYCIRGDQCPYY 230
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +3
Query: 36 TPERNPKEADYTAPIYAPQNRDPLQNAD--AAINYWIQNGAPTH 161
TP E +A IY P NRDPL + AIN N H
Sbjct: 484 TPSPTRSEMLRSAAIYCPINRDPLSQREELRAINRSTSNTGAYH 527
>Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical
protein C08E8.3 protein.
Length = 249
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -1
Query: 290 TLNFGIRTSFTTLIG---VYRWNSGNFTV*IELPRTSSGADTKDKFVGRRTIL 141
T N GI + F+++ +++ ++ +FT + + + S DTK F+ + T+L
Sbjct: 45 TTNCGIISIFSSIFNLNPIHKTSTSSFTSKVLIIKVSINTDTKTSFLEKHTML 97
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +3
Query: 36 TPERNPKEADYTAPIYAPQNRDPLQNAD--AAINYWIQNGAPTH 161
TP E +A IY P NRDPL + AIN N H
Sbjct: 484 TPSPTRSEMLRSAAIYCPINRDPLSQREELRAINRSTSNTGAYH 527
>Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical
protein W07G1.2 protein.
Length = 363
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 134 VIYSSVGVL*RIAVLRCVNRCSVVRLFGVTFRCIIVKC 21
++Y +L VL+C C +R+F C+I C
Sbjct: 35 IVYGIFHLLIMYFVLKCAYICLKIRVFHWNLTCLIFSC 72
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +3
Query: 3 DIVNIQAFDYYTPERNP--KEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLG 176
D VN+ + DYY P N +AP+Y N D+ + Y+ K +
Sbjct: 238 DFVNVFSMDYYGPWPNQWGTPTGPSAPLYGGIGVKKHFNVDSTMKYYTCMTEDPSKFNMV 297
Query: 177 ISTTGRTWK 203
I R WK
Sbjct: 298 IPFYVRLWK 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,705,712
Number of Sequences: 27780
Number of extensions: 231914
Number of successful extensions: 564
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -