Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_D23
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal glan... 29 2.1
U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein. 29 3.6
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 4.8
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 2 protein.
Length = 249
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Frame = +3
Query: 12 TQRCSPSYSSCQFFWSASTAGTC--------------SLKSLVNTSNNMRISRSSGP-TP 146
TQ+C + C F S T GTC SL+S N SN + + R+ P T
Sbjct: 124 TQQCPKTCGRCSSFSSTPTTGTCTDLKNPKTGTSDCASLRSFCNDSNYIDLMRTQCPRTC 183
Query: 147 GYAGKRVLSLSTLTAPQV 200
G+ G S +T ++ V
Sbjct: 184 GFCGSSGSSSTTRSSATV 201
>U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical
protein C14E2.5 protein.
Length = 147
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +2
Query: 344 TKTHIPGFGDKMTAAGKVNLFHNDNHDFSAKAFATKNMPNIPQVPNFNTVGAGVDYMFKD 523
T IP F + A K LF +N D + + N + NF + + Y +D
Sbjct: 10 TAMEIPTFARALNAEPKSQLFLKENQDSQPRLLVSTAEKNGSVISNFKS--SWNHYYIED 67
Query: 524 KIGASATAAHTDVFD 568
+ + T VFD
Sbjct: 68 NSSSDENISQTTVFD 82
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 486 LKFGT*GIFGMFLVANALALK-SWLSLWKRFTLP 388
L+F T GI G+F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 486 LKFGT*GIFGMFLVANALALK-SWLSLWKRFTLP 388
L+F T GI G+F + K SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z68105-6|CAA92119.4| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 523 VLEHVVHSGTDSVEVRNLRNIWHVFSGECFGTEIVVVVMEEIYFAGSRHFVTEPRDMS 350
V+ + H T+ VRNL+ ++HVF ++IV + + FA + + MS
Sbjct: 746 VINELFH--TERTHVRNLKILYHVFYKPIVTSKIVTEELANLLFANLEELLNLHKSMS 801
>Z68010-4|CAJ76939.1| 1340|Caenorhabditis elegans Hypothetical
protein F13E6.6 protein.
Length = 1340
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 523 VLEHVVHSGTDSVEVRNLRNIWHVFSGECFGTEIVVVVMEEIYFAGSRHFVTEPRDMS 350
V+ + H T+ VRNL+ ++HVF ++IV + + FA + + MS
Sbjct: 746 VINELFH--TERTHVRNLKILYHVFYKPIVTSKIVTEELANLLFANLEELLNLHKSMS 801
>AY436362-1|AAR30497.1| 1293|Caenorhabditis elegans RhoGEF protein.
Length = 1293
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 523 VLEHVVHSGTDSVEVRNLRNIWHVFSGECFGTEIVVVVMEEIYFAGSRHFVTEPRDMS 350
V+ + H T+ VRNL+ ++HVF ++IV + + FA + + MS
Sbjct: 699 VINELFH--TERTHVRNLKILYHVFYKPIVTSKIVTEELANLLFANLEELLNLHKSMS 754
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 427 QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQGQDWC 534
QCQ + AKY Q+C+ + H Q WC
Sbjct: 25 QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 266 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 367
L +MK+ A A +AY DNVNG L++ PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,127,092
Number of Sequences: 27780
Number of extensions: 325067
Number of successful extensions: 839
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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