Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_D22
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical ... 27 1.4
AF067948-6|AAC17701.1| 337|Caenorhabditis elegans Seven tm rece... 27 1.8
Z75954-3|CAB00108.1| 323|Caenorhabditis elegans Hypothetical pr... 27 2.4
U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical p... 26 4.2
Z81550-7|CAH60764.1| 581|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z70211-6|CAH60769.1| 581|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical pr... 25 7.3
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 25 7.3
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 25 7.3
AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear recep... 25 7.3
AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical ... 25 7.3
AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical ... 25 7.3
AC025724-4|AAP31423.1| 612|Caenorhabditis elegans Hypothetical ... 25 7.3
AC025724-3|AAG23379.2| 662|Caenorhabditis elegans Hypothetical ... 25 7.3
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 25 9.7
L25599-2|AAK84536.1| 419|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF016683-4|AAB66195.1| 410|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical
protein C08E3.5 protein.
Length = 248
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 131 IFWKNM-YEERLQCLN*IYSMRFH 199
I W + Y E+L C++ +Y+MR+H
Sbjct: 53 INWLTLNYSEKLHCVSIVYNMRYH 76
>AF067948-6|AAC17701.1| 337|Caenorhabditis elegans Seven tm
receptor protein 30 protein.
Length = 337
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -3
Query: 239 LDLTPFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDRYF 60
+ + PF+ Y N S N N+A +P ++ + SG ++++F + RY+
Sbjct: 62 MQIHPFFHSY---NNSL---INFNMAELPKDLATLQVASYSGVYVTIVSFFTILLAFRYW 115
Query: 59 RNTYITSLTTF 27
R T T + F
Sbjct: 116 RMTGSTIVNCF 126
>Z75954-3|CAB00108.1| 323|Caenorhabditis elegans Hypothetical
protein F58H1.5 protein.
Length = 323
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 149 TYSSRKFPINSGHVYILINYFALSPGDRYFRNTYIT 42
TY+S K PIN G +L+ + G R F +T T
Sbjct: 117 TYNSMKQPINGGPPAVLMYSNQSNAGSRLFHHTPTT 152
>U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical
protein C09B9.2 protein.
Length = 328
Score = 26.2 bits (55), Expect = 3.2
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 225 WGEVQNLWSYL 257
WGEV++LW+YL
Sbjct: 91 WGEVRDLWAYL 101
>Z66521-12|CAA91397.3| 614|Caenorhabditis elegans Hypothetical
protein W02B12.4 protein.
Length = 614
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -3
Query: 149 TYSSRKFPINSGHVYILINYFALSPGDRYFRNTYITSLTTF 27
TY +FP G VY NYF + DR ITSLT F
Sbjct: 486 TYHCHEFPYIWG-VY-KDNYFEFNDDDRTVSAFLITSLTNF 524
>Z81550-7|CAH60764.1| 581|Caenorhabditis elegans Hypothetical
protein K11E4.5b protein.
Length = 581
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = -3
Query: 227 PFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDR 66
P+ + ++ S ++++ ++ H YS+ K P ++N F P DR
Sbjct: 258 PYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNNFTFVPADR 311
>Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = -3
Query: 227 PFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDR 66
P+ + ++ S ++++ ++ H YS+ K P ++N F P DR
Sbjct: 255 PYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNNFTFVPADR 308
>Z70211-6|CAH60769.1| 581|Caenorhabditis elegans Hypothetical
protein K11E4.5b protein.
Length = 581
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = -3
Query: 227 PFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDR 66
P+ + ++ S ++++ ++ H YS+ K P ++N F P DR
Sbjct: 258 PYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNNFTFVPADR 311
>Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = -3
Query: 227 PFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDR 66
P+ + ++ S ++++ ++ H YS+ K P ++N F P DR
Sbjct: 255 PYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNNFTFVPADR 308
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 170 NIATVPHTYSSRKFPINSGHVYILINYFALSPGDRYFRNTYITSLTTF 27
+I P+ ++ + + V ++ ++F LSP D+ + +T+ TTF
Sbjct: 8 SIIQPPNLKTAAEGDVKEYIVQVVTSHFGLSPRDQTTLDVELTAATTF 55
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 170 NIATVPHTYSSRKFPINSGHVYILINYFALSPGDRYFRNTYITSLTTF 27
+I P+ ++ + + V ++ ++F LSP D+ + +T+ TTF
Sbjct: 8 SIIQPPNLKTAAEGDVKEYIVQVVTSHFGLSPRDQTTLDVELTAATTF 55
>AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-71 protein.
Length = 579
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = -3
Query: 227 PFYDQYLK*NESASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSPGDR 66
P+ + ++ S ++++ ++ H YS+ K P ++N F P DR
Sbjct: 256 PYGELPVEDRSSLLKRYSVRKLSLDHFYSASKHPEYCARGEFVMNNFTFVPADR 309
>AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical
protein T23E1.2 protein.
Length = 499
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 273 RSLVQINNSINFGPHPILRPILKM 202
R ++ N S+NFG IL P L+M
Sbjct: 73 RRVIDANKSMNFGISNILSPNLRM 96
>AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical
protein F57H12.4 protein.
Length = 454
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 158 VPHTYSSRKFPINSGHVYILINYFALSPGDRYFRNT 51
+P YSS KFPI + +++ + L RY T
Sbjct: 393 MPAAYSSNKFPIKKRTINLMLIFKHLVEDVRYASTT 428
>AC025724-4|AAP31423.1| 612|Caenorhabditis elegans Hypothetical
protein Y67D8C.3b protein.
Length = 612
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 273 RSLVQINNSINFGPHPILRPILKM 202
R ++ N S+NFG IL P L+M
Sbjct: 195 RRVIDANKSMNFGISNILSPNLRM 218
>AC025724-3|AAG23379.2| 662|Caenorhabditis elegans Hypothetical
protein Y67D8C.3a protein.
Length = 662
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 273 RSLVQINNSINFGPHPILRPILKM 202
R ++ N S+NFG IL P L+M
Sbjct: 245 RRVIDANKSMNFGISNILSPNLRM 268
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 29 KSLEKLYKYFENIDHLVIRQNS*SEYKHV 115
+SLE ++N+D + IR+N+ EY +
Sbjct: 121 RSLEGHKTLYDNVDVVTIRENTEGEYSGI 149
>L25599-2|AAK84536.1| 419|Caenorhabditis elegans Hypothetical
protein F54H12.2 protein.
Length = 419
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 152 HTYSSRKFPINSGHVYILINYFALSPG 72
+ + +KF N VY L+N F L+ G
Sbjct: 192 YNHGQQKFKFNVTDVYALVNEFDLTDG 218
>AF016683-4|AAB66195.1| 410|Caenorhabditis elegans Hypothetical
protein K09F6.5 protein.
Length = 410
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 152 HTYSSRKFPINSGHVYILINYFALSPG 72
+ + +KF N VY L+N F L+ G
Sbjct: 213 YNHGQQKFKFNVTDVYALVNEFDLTDG 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,956,328
Number of Sequences: 27780
Number of extensions: 110936
Number of successful extensions: 203
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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