Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D22
         (274 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   1.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   2.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   2.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   2.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   3.7  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    20   4.8  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        19   8.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 32  SLEKLYKYFENIDHLV 79
           +++KLY YF+  D L+
Sbjct: 457 NIDKLYTYFDKCDTLI 472


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 32  SLEKLYKYFENIDHLV 79
           +++KLY YF+  D L+
Sbjct: 457 NIDKLYTYFDKCDTLI 472


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 194 SASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSP 75
           S SNK   N     + Y++  +  N   +Y  INY    P
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 194 SASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSP 75
           S SNK   N     + Y++  +  N   +Y  INY    P
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 194 SASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSP 75
           S SNK   N     + Y++  +  N   +Y  INY    P
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 238 WTSPHSTTNT*NEMKAHRINL 176
           W  PH++TN  N +  +R +L
Sbjct: 303 WQLPHNSTNPPNILLYYRDSL 323


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -3

Query: 194 SASNKFNLNIATVPHTYSSRKFPINSGHVYILINYFALSP 75
           S SN+   N     + Y++  +  N   +Y  INY    P
Sbjct: 84  SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 71 DRYFRNTYITSLTTFKPLEFY 9
          D  + + Y  SL   KP+ FY
Sbjct: 3  DCLYLDVYTNSLDQSKPVMFY 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,108
Number of Sequences: 438
Number of extensions: 1403
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)