Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_D21
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.4
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical ... 29 3.3
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical p... 27 7.7
Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical p... 27 7.7
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF125958-1|AAD14729.1| 342|Caenorhabditis elegans Serpentine re... 27 7.7
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 27 7.7
AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine re... 27 7.7
>AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical
protein C24D10.4 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.4
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 5/119 (4%)
Frame = +3
Query: 123 NGEGTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCL-IIGYYNLV- 296
+G G NR PPPP + V ++ G P+ G L I Y LV
Sbjct: 104 DGMGNLNTNRGPPPPPVKGINVPLVAIILGLLSRAIMLLTG--PINIGILWAIFYVTLVS 161
Query: 297 --SAVCXXXXXXXXXXXXNNYMDPNNNTEK-RNLGLTLVIFCSILMIFLALHLIFTILL 464
SAV M NN EK N G ++ F + F A L+ ++L
Sbjct: 162 RFSAVGLNNQTRNELAAVFQAMGNNNQFEKIMNAGFKIIEFIQTTVSFAASFLLAHMIL 220
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 351 YMDPNNNTEKRNLGLTLVIFCSILMIFLA 437
+MD NN +EK +G+T ++ S +++ LA
Sbjct: 284 FMDINNRSEKFTVGMTNIMSMSFILVILA 312
>Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 392 LNFGDILLYINDISC-VAFDIYNITSSRCAQ 481
LN D+L ++ I+C VAF +Y+ TSSR Q
Sbjct: 297 LNLADVLDLLSLINCYVAFLVYSFTSSRYRQ 327
>AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 392 LNFGDILLYINDISC-VAFDIYNITSSRCAQ 481
LN D+L ++ I+C VAF +Y+ TSSR Q
Sbjct: 297 LNLADVLDLLSLINCYVAFLVYSFTSSRYRQ 327
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical protein
F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 156 APPPPYVSVEAQPVNVVTSSKYYDS 230
APPP Y+++ A PVN + Y S
Sbjct: 1078 APPPHYLAIAAPPVNSIYGQTEYTS 1102
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical protein
F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 156 APPPPYVSVEAQPVNVVTSSKYYDS 230
APPP Y+++ A PVN + Y S
Sbjct: 1078 APPPHYLAIAAPPVNSIYGQTEYTS 1102
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 372 TEKRNLGLTLVIFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVL 548
T + ++ + + ++L F + IFT+ + + + G+ Y I+A + FG+ VL
Sbjct: 187 TRQWSMQVQSAFYIAVLTTFFQIGPIFTMPVAGALCTSSLGWPAVYYIHAVVTFGLFVL 245
>Z93388-15|CAB07667.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 405 IFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRI 575
+FC+ FL L ++F +GV+K ++ YV + FG L T+ NLI +
Sbjct: 38 MFCNF---FLLLLIVFKSPSDMGVYK----FLMIYVAIFELFFGWLELMTVANLISV 87
>Z93374-10|CAB07561.1| 356|Caenorhabditis elegans Hypothetical
protein C06C6.1 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 405 IFCSILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYASILFGMSVLATITNLIRI 575
+FC+ FL L ++F +GV+K ++ YV + FG L T+ NLI +
Sbjct: 38 MFCNF---FLLLLIVFKSPSDMGVYK----FLMIYVAIFELFFGWLELMTVANLISV 87
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 559 VIVANTLMPKSIEAYIT*ALTYPCLFLCTPTTSNIV 452
++ A T +P + I A+TYP + TP+ S IV
Sbjct: 574 ILDATTALPTTSSPPILSAITYPVISTTTPSPSGIV 609
>AF125958-1|AAD14729.1| 342|Caenorhabditis elegans Serpentine
receptor, class j protein9 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 417 ILMIFLALHLIFTILLVVGVHKNKHGYV 500
I IF L+ I IL +G+ NKHG+V
Sbjct: 47 IFAIFDILYSISEILTPIGITGNKHGFV 74
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +3
Query: 123 NGEGTATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCCGIFPLKTGCLIIGYYNLVSA 302
N +GTA R +VS P+ V + +++ ++C +GY N ++
Sbjct: 753 NSDGTALNCSRCDSGRFVSPSCFPIPVPVNDVHFEPFSCLSFVRSLPAQKTLGYRNQMNQ 812
Query: 303 V 305
V
Sbjct: 813 V 813
>AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine
receptor, class j protein32 protein.
Length = 325
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 414 SILMIFLALHLIFTILLVVGVHKNKHGYVKAYVIYAS--ILFGMSVLATITNLIRIQYLS 587
+ L+ + A+ IF LL + V HGY Y+I+ S IL S L+ + IR ++
Sbjct: 40 AFLLYYFAIFNIFHSLLDIFVPIGVHGYRYCYLIFLSDGILLEKSSLSMLLLAIRCSLIA 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,011,439
Number of Sequences: 27780
Number of extensions: 294741
Number of successful extensions: 929
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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