Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D21
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.98 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   6.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.2  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 87   SHKLNSRNDHIHNGEGTATENRRAPPPP 170
            SH       H++        NRR PPPP
Sbjct: 1678 SHSTWDPRRHMYEELNHCAPNRRCPPPP 1705


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 559 VIVANTLMPKSIEAYIT*ALTYPCLFLCTPTTSNIVNI 446
           V + NTL+ +S++  +T     P + + +PT    + I
Sbjct: 252 VPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQI 289


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 139 PPRIGVHRHRLMYLLRRSLSTWLQAASITTPTHAVVFSL*KRDA*SSVII-TWCQLFVYS 315
           P  +G+HR     +L  S       A   TPT+AVV S         V++  +C+L+ Y+
Sbjct: 160 PISLGLHRANEPVVLDDSKEEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYA 219


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 106 GTTIYTMEKEPPPRIGVHRHRLMYLLRRSLSTWLQAASIT 225
           GTT  T E++P P   V  H +  L +    + +Q  S T
Sbjct: 110 GTTNLTFEEDPEPFGRVRDHNISALCKELGISVVQKVSHT 149



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 147 SRWRFLLHCV 118
           ++WRFLL C+
Sbjct: 68  NKWRFLLQCL 77


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 158 CTPILGGGSFSIVY 117
           C   LG G F IVY
Sbjct: 69  CGTFLGSGGFGIVY 82


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 135 TATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCC 242
           +A + +   P P  SV + P  V  + KY     CC
Sbjct: 571 SAIQFKLGHPEPPESVCSLPCEVGQAKKYVAGEQCC 606


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 405 IFCSILMIFLALHLIFT 455
           I C I ++FLAL+   T
Sbjct: 7   ILCGIAVLFLALYYYLT 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,912
Number of Sequences: 438
Number of extensions: 3836
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)