Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D19
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   0.60 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   4.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   4.2  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    23   5.6  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             22   7.4  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    22   7.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    22   7.4  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   9.8  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    22   9.8  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    22   9.8  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 251 VWVALSWEDEFLSVDTFQLWRYKRDQVESHVIWTP 355
           +W+ L W D  L  +T +    +  ++  H IW P
Sbjct: 89  IWLKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKP 123


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 94  PCKKRSYYKDLSCAYNN*FRPVTDHKSSVNVQVRFAIKYI 213
           P  KR  Y DL   YN   RPV +   ++ V+++  +  +
Sbjct: 22  PDAKR-LYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQL 60


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 94  PCKKRSYYKDLSCAYNN*FRPVTDHKSSVNVQV 192
           P  KR  Y DL   YN   RPV+++  +V V++
Sbjct: 34  PDAKR-LYDDLLSNYNRLIRPVSNNTDTVLVKL 65


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 22  CLTNILIHRHVTADECPTDREQPVPCKKRSYYK 120
           CL N+    H+T +    +R Q VPC   S  K
Sbjct: 33  CLINLGKGEHLTEEFKAINRFQKVPCITDSQIK 65


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -1

Query: 400 LIHCSCGIGIS 368
           ++HCS G+G++
Sbjct: 869 IVHCSAGVGVT 879


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 269 WEDEFLSVDTFQLW 310
           W+DE L+ + F LW
Sbjct: 52  WKDERLAFNAFALW 65


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 118 CSNCASYMGLVAPDRLDIHQ 59
           C  CA   GL +P +   HQ
Sbjct: 254 CIECAECRGLFSPQKFVCHQ 273


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 94  PCKKRSYYKDLSCAYNN*FRPVTDHKSSVNV 186
           P  KR  Y DL   YN   RPV ++  ++ V
Sbjct: 28  PDAKR-LYDDLLSNYNRLIRPVVNNTETLTV 57


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 94  PCKKRSYYKDLSCAYNN*FRPVTDHKSSVNVQV 192
           P  KR  Y DL   YN   RPV ++   + V++
Sbjct: 22  PDSKR-LYDDLLSNYNRLIRPVGNNSDRLTVKM 53


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 232 PLRHRSLCT*SRSEL 188
           PLR R+LCT  R+ L
Sbjct: 195 PLRARALCTYGRARL 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,995
Number of Sequences: 2352
Number of extensions: 8400
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)