Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D19
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin acti...    30   1.0  
AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p pro...    30   1.4  
AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA ...    30   1.4  

>Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin
           activating enzyme protein.
          Length = 1008

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 239 SRCIVWVALSWEDEFLSVDTFQLWRYKRDQVES--HVIWT-PRMAP 367
           + C+ W  L WED++++     L+ +  DQ+ S     W+ P+  P
Sbjct: 656 AHCVEWARLYWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKQCP 701


>AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p
           protein.
          Length = 1191

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 239 SRCIVWVALSWEDEFLSVDTFQLWRYKRDQVES--HVIWT-PRMAP 367
           + C+ W  L WED++++     L+ +  DQ+ S     W+ P+  P
Sbjct: 839 AHCVEWARLYWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKRCP 884


>AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA
           protein.
          Length = 1191

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 239 SRCIVWVALSWEDEFLSVDTFQLWRYKRDQVES--HVIWT-PRMAP 367
           + C+ W  L WED++++     L+ +  DQ+ S     W+ P+  P
Sbjct: 839 AHCVEWARLYWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKRCP 884


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,254,279
Number of Sequences: 53049
Number of extensions: 349909
Number of successful extensions: 929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)