Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_D15
(373 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358... 31 0.38
11_04_0260 - 15509658-15509780,15510092-15510161,15510265-155104... 30 0.67
02_04_0645 + 24703102-24704598 30 0.67
04_01_0446 - 5815231-5816202 29 0.88
04_04_0470 + 25474029-25475525 29 1.5
09_02_0414 - 8825575-8826654,8826737-8827144 28 2.0
05_03_0618 - 16262826-16263097,16263111-16263183 28 2.0
02_04_0646 + 24710348-24711838 28 2.0
06_03_0905 + 25843547-25844314 28 2.7
02_01_0302 - 2021221-2023305 28 2.7
09_04_0160 + 15226762-15227032,15227138-15227373,15227469-152275... 27 3.6
12_01_0177 - 1312229-1312498,1314758-1315630,1315729-1315885,131... 27 4.7
11_01_0176 - 1403284-1403553,1404313-1404468,1404569-1404787,140... 27 4.7
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 27 4.7
01_06_0715 + 31416338-31416500,31416601-31416710,31416808-314168... 27 6.2
11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174... 26 8.2
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 26 8.2
09_06_0197 - 21494520-21494807,21494871-21495018,21495342-21495394 26 8.2
05_01_0522 - 4506667-4507254,4507474-4507824,4507967-4508163,450... 26 8.2
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 26 8.2
>06_03_0749 +
24133302-24134274,24134585-24135272,24135751-24135857,
24137565-24137815
Length = 672
Score = 30.7 bits (66), Expect = 0.38
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -2
Query: 306 ERSMHGDDAKFTRQSYG*FEILGHRDEIRRRWQRESLRRFWMASR-RSAHDRLQQ 145
ERS+ G + + R E +G++DE+ RR +RE + SR R AH RL Q
Sbjct: 105 ERSVAGHEVEKKRLLGRLEEEIGNKDEVIRRLEREIAEKAADFSRERDAHQRLLQ 159
>11_04_0260 -
15509658-15509780,15510092-15510161,15510265-15510438,
15511098-15511528
Length = 265
Score = 29.9 bits (64), Expect = 0.67
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 365 LPRPISLVIIQHTVTPTSETNE-ACMVTMR-SLQDNHMDNLKYWDIGMKFVVGGNGKVYE 192
LP P L+++Q T+ S + A V R S + +D+ Y + VGG G +
Sbjct: 5 LPLPALLLVVQPTMAVASHGGDGAAFVAARPSSVHSSLDDSAYGILNDGEGVGGGGGGEQ 64
Query: 191 GSGWLHVGAHTIGY 150
G GW + + Y
Sbjct: 65 GGGWANGSGYESRY 78
>02_04_0645 + 24703102-24704598
Length = 498
Score = 29.9 bits (64), Expect = 0.67
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 187 LDGFTSERTRSVTTGNLSGSASSVTTTI-KRQRTSNWKL*DHC 62
+DG S R+ T +L+GS +++TT KR T +W + D C
Sbjct: 271 IDGQWSAVGRTAVTTSLAGSVAALTTLYGKRWLTGHWNVTDVC 313
>04_01_0446 - 5815231-5816202
Length = 323
Score = 29.5 bits (63), Expect = 0.88
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 306 ERSMHGDDAKFTRQSYG*FEILGHRDEIRRRWQR-ESLRRFWM 181
+R GD ++R G + + RRRW+R ES+RR+WM
Sbjct: 262 QRWSGGDGLGWSRSGSGAWRRWMGMEPERRRWKRAESMRRWWM 304
>04_04_0470 + 25474029-25475525
Length = 498
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 187 LDGFTSERTRSVTTGNLSGSASSVTTTI-KRQRTSNWKL*DHC 62
++G S R+ T L+GS +++TT KR +T +W + D C
Sbjct: 269 INGQWSGVGRTAVTTTLAGSVAALTTLFGKRLQTGHWNVVDVC 311
>09_02_0414 - 8825575-8826654,8826737-8827144
Length = 495
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 178 SHPEPS*TFPLPPTTNFIPMSQYFKLSI 261
SHP + FP PP ++ P SQ F+ ++
Sbjct: 39 SHPAYAMNFPFPPFPHYPPYSQNFQYAV 66
>05_03_0618 - 16262826-16263097,16263111-16263183
Length = 114
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 216 RWQRESLRRFWMASRRSAHDR 154
RW R + RR W+ RRS H R
Sbjct: 8 RWSRMARRRRWLKRRRSGHCR 28
>02_04_0646 + 24710348-24711838
Length = 496
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 160 RSVTTGNLSGSASSVTTTI-KRQRTSNWKL*DHC 62
R+ T L+GS +++TT KR +T +W + D C
Sbjct: 278 RTAVTTTLAGSTAALTTLFGKRLQTGHWNVIDVC 311
>06_03_0905 + 25843547-25844314
Length = 255
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 154 PIVCAPT*SHPEPS*TFPLPPTT 222
P+V P ++P P T+P PP T
Sbjct: 130 PVVVGPPVTYPTPPVTYPTPPVT 152
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 154 PIVCAPT*SHPEPS*TFPLPPTTN 225
P +PT S+P PS ++P PP +N
Sbjct: 417 PPSSSPTPSYPSPSSSYPAPPGSN 440
>09_04_0160 +
15226762-15227032,15227138-15227373,15227469-15227565,
15227657-15227783,15227870-15228482,15228572-15228835,
15228918-15229130,15229253-15229460,15229552-15229748,
15229830-15230183,15230287-15230874
Length = 1055
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 254 NLKYWDIGMKFVVGGNGKVYEGSGWLHVGAHTIGYN 147
N ++DI MK + G G VY G+G + GYN
Sbjct: 602 NTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYN 637
>12_01_0177 -
1312229-1312498,1314758-1315630,1315729-1315885,
1316207-1316247
Length = 446
Score = 27.1 bits (57), Expect = 4.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 209 CHLRRISSRCPNISNYPYD 265
CHL+R+ PN++ + YD
Sbjct: 286 CHLQRMELHAPNLTTFEYD 304
>11_01_0176 -
1403284-1403553,1404313-1404468,1404569-1404787,
1405198-1405440,1405539-1405695,1406186-1406226
Length = 361
Score = 27.1 bits (57), Expect = 4.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 209 CHLRRISSRCPNISNYPYD 265
CHL+R+ PN++ + YD
Sbjct: 149 CHLQRMELHAPNLTTFEYD 167
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 242 WDIGMKFVVGGNGKVYEGSGWLHVGAHTIGYNRKSI 135
WD + F+ GK + G L VG+ + N KS+
Sbjct: 1186 WDQRLIFIANSGGKYCDTLGGLRVGSRSSDSNDKSV 1221
>01_06_0715 +
31416338-31416500,31416601-31416710,31416808-31416880,
31416988-31417135,31417867-31418133,31418234-31418576,
31418665-31418802,31419389-31419514,31419626-31419838,
31419918-31420164,31420247-31420446,31420538-31420891,
31420984-31421568
Length = 988
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 254 NLKYWDIGMKFVVGGNGKVYEGSGWLHVGAHTIGYNRKSI 135
N+ ++D+ MK + G G VY G+G GY S+
Sbjct: 522 NVVFFDVNMKGLDGLQGPVYVGTGCCFYRQALYGYGPPSL 561
>11_06_0766 -
27115441-27115760,27115878-27116025,27116213-27117417,
27117510-27117753,27120181-27120357
Length = 697
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 143 KSIGISFVGNYNNKEATNQQLEAVRSLLQ 57
KS+G+ F+GN K++ + RSLLQ
Sbjct: 380 KSVGLHFLGNCLGKKSKTVSSDHQRSLLQ 408
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 111 VVTDEADPDRFPVVTDRVRSDVKPSRTFVNFPVATYDEF 227
VVT + +PD P + +S + F+NF ++ F
Sbjct: 256 VVTFDKNPDNHPYLLKFFQSSAAKAMLFLNFSTGPFESF 294
>09_06_0197 - 21494520-21494807,21494871-21495018,21495342-21495394
Length = 162
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 194 RKLSRCHLRRISSRCPNI 247
RKL+ LRR SRCP++
Sbjct: 57 RKLASTELRRAGSRCPSV 74
>05_01_0522 -
4506667-4507254,4507474-4507824,4507967-4508163,
4508324-4508582,4508656-4508868,4508946-4509071,
4509159-4509296,4509376-4509721,4509822-4510088,
4510427-4510616,4510700-4510784,4510885-4511072,
4511262-4511457,4512027-4512113
Length = 1076
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 275 LQDNHMD-NLKYWDIGMKFVVGGNGKVYEGSG 183
L D + + N+ ++DI MK + G G VY G+G
Sbjct: 599 LHDRYANRNIVFFDINMKGLDGIQGPVYVGTG 630
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -3
Query: 269 DNHMDNLKYWDIGMKFVVGGNGKVYEGSGW 180
D+H + W K ++GG Y G W
Sbjct: 2837 DSHQKSPSTWGATAKVLLGGRAWAYNGGAW 2866
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,760,565
Number of Sequences: 37544
Number of extensions: 226175
Number of successful extensions: 665
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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