Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_D08
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0006 + 16257288-16259522 29 0.60
04_04_1517 + 34125549-34125634,34125725-34125789,34125878-341260... 27 2.4
03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229 27 3.2
01_06_1083 - 34403769-34403774,34403819-34403918,34404235-344043... 27 3.2
08_02_1266 - 25721277-25721354,25721429-25722236,25724215-25724567 27 4.2
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499... 27 4.2
01_01_0407 - 3067071-3070085 27 4.2
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674... 26 5.6
09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194... 26 5.6
07_03_0116 + 13584689-13584725,13585167-13585234,13586091-135861... 26 5.6
03_02_0529 + 9218734-9218793,9218898-9220050,9220133-9220192,922... 26 5.6
02_04_0537 - 23734010-23734715,23735326-23735333 26 5.6
10_08_0066 + 14610220-14610798,14610928-14611287 26 7.4
10_02_0152 - 5902554-5903058,5904171-5904670 26 7.4
02_04_0236 - 21170753-21170794,21171089-21172220,21172332-211726... 26 7.4
02_02_0493 + 10921284-10922558 26 7.4
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 26 7.4
12_02_0123 - 13930138-13932471 25 9.7
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 25 9.7
05_04_0389 - 20845490-20845600,20845697-20846006,20846097-208462... 25 9.7
05_03_0168 - 9116648-9117775,9118699-9118885,9119724-9119821,911... 25 9.7
03_06_0214 + 32411341-32411347,32412642-32412878,32412955-324132... 25 9.7
01_06_1774 + 39803747-39803825,39805338-39805555,39805856-398064... 25 9.7
>03_04_0006 + 16257288-16259522
Length = 744
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +3
Query: 60 IARRTDARWGQRIIEWLPRTGFEWLPRTAIRSKVDQRPG*GRGI 191
+ R T W W PR G +W+ ++ R K P G+
Sbjct: 542 VTRLTSGAWTDTHCSWSPREGSDWIVFSSTRDKPAAAPADDNGL 585
>04_04_1517 +
34125549-34125634,34125725-34125789,34125878-34126085,
34126819-34126911,34127302-34127389,34127788-34128060
Length = 270
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 45 QWARHIARRTDARWGQRIIEWLPRTGFEWLPRTAIRSKVD-QRP 173
QW R + + R R++ WL GF W AI K++ Q+P
Sbjct: 227 QWQRGQSLPLENRRA-RVVRWLQYRGFNWAVTNAIVRKLEAQKP 269
>03_02_0883 - 12142550-12142663,12142723-12142782,12142954-12143229
Length = 149
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 155 QGGPTPWLRSRNSDGYGLRMTGRPGDLWRKPMSSSGRL 268
QG TPW R G G R D+W + GR+
Sbjct: 112 QGRVTPWEGERRRRGLGRRTAAAQEDMWGEGDDLWGRM 149
>01_06_1083 -
34403769-34403774,34403819-34403918,34404235-34404318,
34404427-34404506,34404614-34404707,34404796-34404887,
34405335-34405425,34405617-34405719,34405919-34406008,
34406154-34406235,34406434-34406481,34406601-34406897,
34406992-34407078,34408047-34408247,34408329-34408533,
34409362-34410152
Length = 816
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 278 VRQKDVHYWTWVFSKDLQDDRSCATRIHRNSATLTRALVHLAAYC 144
+R K +H++ ++ + +QD R+ S T + +H AYC
Sbjct: 465 LRDKHLHHYI-IYGESVQDRFEHNRRLRNPSTTAVQQAIHGLAYC 508
>08_02_1266 - 25721277-25721354,25721429-25722236,25724215-25724567
Length = 412
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 262 STTGHGFSPKISRTTGHAQP 203
STTGHG S +S HA P
Sbjct: 379 STTGHGLSKGLSEQQRHAMP 398
>07_03_1203 -
24848342-24848885,24849199-24849204,24849648-24849947,
24852725-24853047,24853076-24853255
Length = 450
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 48 WARHIARRTDARWGQRIIEWLPRTGFEWLPRTA 146
W R RR + R G ++ LP+ G WL A
Sbjct: 55 WFREAYRRFEPRAGDVLLASLPKCGTTWLKALA 87
>01_01_0407 - 3067071-3070085
Length = 1004
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 46 SGLDTL-LAEPMLDGVNGLLNGYHVLDLNGYHVLQYAARWTNALV 177
S LD LA P L+ + L+ L+L ++ + ARW NALV
Sbjct: 181 SSLDAQQLAVPNLESLVANLSNLRELNLGLVNLSENGARWCNALV 225
>10_08_0851 -
21065832-21065948,21066361-21066705,21067181-21067489,
21067574-21067648,21067754-21067917,21067994-21068432
Length = 482
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 236 KDLQDDRSCATRIHRNSATLTRALV 162
K+LQ R CAT+IH+ + + ++
Sbjct: 290 KELQQKRDCATQIHKAAVAINTGVL 314
>09_06_0371 +
22615809-22617431,22618312-22618422,22619361-22619453,
22619562-22619661,22619754-22619834,22620774-22621047,
22621254-22622069,22622921-22623029,22623509-22623602,
22623881-22623939,22624150-22624197
Length = 1135
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 293 FHNLTVRQKDVHYWT 249
FH+ R KDVH WT
Sbjct: 257 FHSTPTRHKDVHTWT 271
>07_03_0116 +
13584689-13584725,13585167-13585234,13586091-13586195,
13587498-13587659,13587771-13587824,13587929-13588078,
13588881-13589090
Length = 261
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 46 SGLDTLLAEPMLDGVNGLLNGYHVL-DLNGYHVLQYAARWT 165
SG L+ L+G+N L G+HV DL + + + WT
Sbjct: 102 SGASILVTSNELEGLNALEAGFHVYPDLYKDNNVHFFTHWT 142
>03_02_0529 +
9218734-9218793,9218898-9220050,9220133-9220192,
9220284-9220363,9220486-9220730,9220815-9221138,
9221211-9221274,9221968-9222144
Length = 720
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 310 R*QEDDSITSQCDKKTSTTGHGFSPKISRTTGHAQ 206
R ++DD +S C ++ T GF P T GH++
Sbjct: 249 RDEDDDDKSSGCTHPSTATNRGFRPNC--TAGHSR 281
>02_04_0537 - 23734010-23734715,23735326-23735333
Length = 237
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 241 SPKISRTTGHAQPVSIGIPRP 179
SP+ SR H PVS+ P P
Sbjct: 135 SPRSSRARAHPAPVSVAAPAP 155
>10_08_0066 + 14610220-14610798,14610928-14611287
Length = 312
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 88 VNGLLNGYHVLDLNGY 135
V G +NGYHVL + GY
Sbjct: 21 VAGTVNGYHVLKIVGY 36
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 66 RRTDARWGQRIIEWLPRTGFEWLPRTAIRSKV 161
RR +AR G ++ LP+ G WL A + V
Sbjct: 54 RRFEARDGDVVVASLPKCGTTWLKALAFATAV 85
>02_04_0236 -
21170753-21170794,21171089-21172220,21172332-21172601,
21173043-21173305,21173406-21173492,21174149-21174326,
21174784-21174984,21175769-21176025
Length = 809
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 191 SDGYGLRMTGRPGDLWRKPMSSSGRL 268
S Y + T G LWR+ SSSG L
Sbjct: 15 SHNYDIESTDGSGGLWRRNGSSSGAL 40
>02_02_0493 + 10921284-10922558
Length = 424
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 121 DLNGYHVLQYAARWTNALVKVAEFRWIRVAHDRSSWRSLEKTH 249
DL G +L+ A T +A RW+RVA D S R + H
Sbjct: 34 DLVGEILLRLAFPTTLVRAALACRRWLRVASDPSFLRRFRELH 76
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 278 VRQKDVHYWTWVFSKDLQDD 219
V KD YW WVF ++ +D
Sbjct: 569 VVDKDDEYWEWVFPDEVGED 588
>12_02_0123 - 13930138-13932471
Length = 777
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 18 SLRIVKLKWQWARHIARRTDARWGQRIIEWLPRTGFEWL 134
+L I+ + A + TD W W PR G +W+
Sbjct: 548 NLYIIDAEKGEAAGVVPLTDGPWTDTHCSWSPREGCDWI 586
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 244 FSPKISRTTGHAQPVSIGIPRP*PGRWSTLLRIAV 140
+SP S TTG + S+G+P G W T RI V
Sbjct: 309 YSPTNSATTGFSGGSSLGLPY--KGSWCTPPRIFV 341
>05_04_0389 -
20845490-20845600,20845697-20846006,20846097-20846242,
20846319-20846426,20846508-20846615,20846997-20847109,
20847340-20847437,20847530-20847714,20847811-20847953,
20848293-20848377,20848486-20848624,20848686-20848780,
20848894-20849037,20849114-20849206,20849310-20849376,
20849529-20849641,20849750-20849845,20853885-20854058
Length = 775
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 204 GCA*PVVLEIFGENPCP 254
GC+ PV+ FG +PCP
Sbjct: 746 GCSIPVMAAKFGGDPCP 762
>05_03_0168 -
9116648-9117775,9118699-9118885,9119724-9119821,
9119948-9120114,9122242-9122578
Length = 638
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 98 Y*MATTYWI*MATTYCNTQQGGPTPW 175
Y +A Y + T+CNT G T W
Sbjct: 357 YHLAVLYMVIPVVTFCNTYATGLTDW 382
>03_06_0214 +
32411341-32411347,32412642-32412878,32412955-32413226,
32413757-32413849,32413928-32414131
Length = 270
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 205 PVSIGIPRP*PGRWSTLLRI 146
P S G P P PG W + LR+
Sbjct: 153 PNSFGPPAPPPGFWMSFLRV 172
>01_06_1774 +
39803747-39803825,39805338-39805555,39805856-39806436,
39807239-39808136
Length = 591
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 294 IP*PHSATKRRPLLDMGFLQRSPGRPVMRNPYPSEFRDLNQG 169
+P PH ++ +L + S G V R P S+FR LN+G
Sbjct: 260 LPCPHDINQQGLML---YNPPSKGNRVFRLPLTSQFRFLNKG 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,328,755
Number of Sequences: 37544
Number of extensions: 233473
Number of successful extensions: 697
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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