Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D05
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    30   0.92 
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    28   3.7  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     28   3.7  
Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 0.92
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 216 HAKELDRQTVSYPWTAPKDLEGDVVFKVTIVKSYAVFWVGIESAPVKV 359
           HA    + +V   W AP+   G VVF+ +++++  +++   E   VK+
Sbjct: 125 HANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKL 172


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 3    YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 158
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1347 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1397


>Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical
           protein T12D8.4 protein.
          Length = 426

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 108 ARQGDKIVGTWTVSPDDTFSQPLNCGEPNNAVT 206
           +R+   +VG   ++ D   ++P  C E N+AVT
Sbjct: 142 SRKAFTVVGIEDINSDPKLNEPATCVESNHAVT 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,647,535
Number of Sequences: 27780
Number of extensions: 253361
Number of successful extensions: 610
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)