Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_D01
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68227-12|CAA92517.2|   86|Caenorhabditis elegans Hypothetical p...   102   2e-22
AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical...    30   1.0  
Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z82055-10|CAB04848.2|  659|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z68227-12|CAA92517.2|   86|Caenorhabditis elegans Hypothetical
           protein F49C12.13 protein.
          Length = 86

 Score =  102 bits (244), Expect = 2e-22
 Identities = 37/78 (47%), Positives = 57/78 (73%)
 Frame = +3

Query: 66  VPITIFTVFWGVIGIVCPFFAPKGPNRGIIQVILILTAATCWLFWLCAYMAQMNPLIGPR 245
           +P+   + FW +IG   P+  PKGPNRGIIQ+++I+TA  CW+FW+  ++ Q+NPLIGP+
Sbjct: 5   IPLVSVSAFWAIIGFGGPWIVPKGPNRGIIQLMIIMTAVCCWMFWIMVFLHQLNPLIGPQ 64

Query: 246 LDNETLIWISRTWGNPMN 299
           ++ +T+ WIS  WG+  N
Sbjct: 65  INVKTIRWISEKWGDAPN 82


>AF025453-12|AAK31405.1|  600|Caenorhabditis elegans Hypothetical
           protein C08F1.8 protein.
          Length = 600

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -3

Query: 428 TRIISTLLCLIIYLFIRNDRFITWTYYTKEVSLLFGQVLHLGPVHWVAPSA*DPDESLIV 249
           T +   LLC +    +R+++ I   YYT  VS     ++ + P+ +VA  A + D+    
Sbjct: 176 TELYCILLCSVDTSLVRDEKVIIGFYYTTYVSCPILNIIVM-PIVYVACLAYNSDQLAFS 234

Query: 248 KSGSD 234
           K  SD
Sbjct: 235 KEASD 239


>Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical
           protein M05B5.2 protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +3

Query: 114 CPFFAPKGPNRGIIQ----VILILTAATCWLFWLCAYMAQM 224
           C F  P G    II     ++L+L A +CW  W C    Q+
Sbjct: 82  CQFAIPTGAVVAIILAAIVLLLVLIAMSCWCCWCCPLYKQL 122


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical protein
            F54F11.2 protein.
          Length = 1589

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 318  SFTPWSCSLGCPKCVRSR*ESHCQVWV 238
            +F  +  +  CP   +S  E HC+VWV
Sbjct: 1558 NFPAFQTAFNCPLGSKSAPEQHCEVWV 1584


>Z82055-10|CAB04848.2|  659|Caenorhabditis elegans Hypothetical
           protein T26H2.7 protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 432 INKNYFNIIMFNNLFIYSKRSIYYMDLLH*RGVSSLW 322
           I+KNY N+I+ N   +Y     Y + L+H   + +LW
Sbjct: 267 ISKNYSNLILSNRFLVYFGDISYSLYLVH-WPIFALW 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,894,654
Number of Sequences: 27780
Number of extensions: 272528
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)