Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C23
         (367 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127118-1|AAI27119.1| 1524|Homo sapiens SAMD9L protein protein.       29   4.6  
BC127117-1|AAI27118.1| 1268|Homo sapiens SAMD9L protein protein.       29   4.6  
AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein.                 29   4.6  
AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein.     29   4.6  

>BC127118-1|AAI27119.1| 1524|Homo sapiens SAMD9L protein protein.
          Length = 1524

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 135 GTSFNNRLIWQEKADYNAIPLKNRVKEVFFSDPGQQIIKGVIARDLDHTDAI 290
           GT+    ++W  K ++    LKN+  +  F++  +Q+I  V  R   H D I
Sbjct: 747 GTTLAMHVLWDLKKNFRCAVLKNKTTD--FAEIAEQVINLVTYRAKSHQDYI 796


>BC127117-1|AAI27118.1| 1268|Homo sapiens SAMD9L protein protein.
          Length = 1268

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 135 GTSFNNRLIWQEKADYNAIPLKNRVKEVFFSDPGQQIIKGVIARDLDHTDAI 290
           GT+    ++W  K ++    LKN+  +  F++  +Q+I  V  R   H D I
Sbjct: 747 GTTLAMHVLWDLKKNFRCAVLKNKTTD--FAEIAEQVINLVTYRAKSHQDYI 796


>AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein.
          Length = 1584

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 135 GTSFNNRLIWQEKADYNAIPLKNRVKEVFFSDPGQQIIKGVIARDLDHTDAI 290
           GT+    ++W  K ++    LKN+  +  F++  +Q+I  V  R   H D I
Sbjct: 747 GTTLAMHVLWDLKKNFRCAVLKNKTTD--FAEIAEQVINLVTYRAKSHQDYI 796


>AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein.
          Length = 1587

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 135 GTSFNNRLIWQEKADYNAIPLKNRVKEVFFSDPGQQIIKGVIARDLDHTDAI 290
           GT+    ++W  K ++    LKN+  +  F++  +Q+I  V  R   H D I
Sbjct: 750 GTTLAMHVLWDLKKNFRCAVLKNKTTD--FAEIAEQVINLVTYRAKSHQDYI 799


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,735,548
Number of Sequences: 237096
Number of extensions: 1142000
Number of successful extensions: 5980
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5980
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)