Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C21
         (428 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447           28   3.7  
04_04_0006 - 22102663-22103705,22105659-22105671                       27   8.5  

>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
          Length = 607

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 219 FVYCGKKLRYIKCTCNID-DFTSTYSVYFNIQ 311
           F YC +K+R ++C  +ID DF   +  +F+++
Sbjct: 521 FEYCVQKIRMLECKGHIDNDFRMKFLTWFSLR 552


>04_04_0006 - 22102663-22103705,22105659-22105671
          Length = 351

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 199 ACKSRI-FLYIVGKSYDTLNVLVISMISLLHIVCILTFKCLTYYLRF 336
           A KSR+  LY++       N++ +  I L+ IV IL   CL + L F
Sbjct: 23  AWKSRVGVLYVMHPITFFTNIIGVVTIVLISIVSILGLICLCHSLNF 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,005,280
Number of Sequences: 37544
Number of extensions: 119101
Number of successful extensions: 197
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)