Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C20
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   2.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   2.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.1  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   6.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   6.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   6.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.1  

>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 252 PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 353
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 252 PLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLAE 353
           P+ K +E V+       Q +KGIA + +EN   E
Sbjct: 89  PVYKMIEVVHAGNADDIQLVKGIANECIENAKGE 122


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 433 LGNPDPLSLFSLMLTKSRPNPPRLIDASA 347
           LGN  P+ L+S +    +P P   +  SA
Sbjct: 417 LGNAPPMLLYSFIEQTLQPGPAVSLKCSA 445


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 433 LGNPDPLSLFSLMLTKSRPNPPRLIDASA 347
           LGN  P+ L+S +    +P P   +  SA
Sbjct: 417 LGNAPPMLLYSFIEQTLQPGPAVSLKCSA 445


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 169 WIAYGNNAYNSI 134
           W+ Y N+A+N I
Sbjct: 312 WLGYSNSAFNPI 323


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 160 YGNNAYNSIKILY 122
           Y NN YN+ K LY
Sbjct: 96  YNNNNYNNYKKLY 108


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 160 YGNNAYNSIKILY 122
           Y NN YN+ K LY
Sbjct: 106 YNNNNYNNYKKLY 118


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 160 YGNNAYNSIKILY 122
           Y NN YN+ K LY
Sbjct: 341 YNNNNYNNYKKLY 353


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +3

Query: 48  PPGAESDEGIKSLIRTLNIGMRFKMYKIFILLYALLPYAI 167
           PP + +     ++   L I   F +Y++  +++ L+P  I
Sbjct: 188 PPESGNYSADSAMCAMLTIYADFPLYELSTIIFFLIPMLI 227


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 344 AIL*IFDRYTFD 309
           A+L IFD YT+D
Sbjct: 493 ALLDIFDTYTYD 504


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,555
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)