Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C19
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   5.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.2  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   9.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.5  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 237 SPQYVYINQYRNSDSRYGDLLTGLALYNM 323
           S  Y Y N Y N ++ Y      L  YN+
Sbjct: 89  SNNYNYNNNYNNYNNNYNTNYKKLQYYNI 117


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 324 PYYKELIQSVDLHSGYLNF 268
           P Y E    VDL   Y+NF
Sbjct: 520 PKYDEFGHEVDLVHNYMNF 538


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 324 PYYKELIQSVDLHSGYLNF 268
           P Y E    VDL   Y+NF
Sbjct: 520 PKYDEFGHEVDLVHNYMNF 538


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 324 PYYKELIQSVDLHSGYLNF 268
           P Y E    VDL   Y+NF
Sbjct: 146 PKYDEFGHEVDLVHNYMNF 164


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 75  SNPSFPTYTSSNNYNKAPHH 134
           +NP    Y  +NNYN    H
Sbjct: 85  NNPLSNNYNYNNNYNNYNKH 104


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 369 NRHSNNVHDSDCVIVPYYKELIQSVDLH 286
           NRHS+ +     ++ P   E I + ++H
Sbjct: 240 NRHSSTLDIDHKMLTPIKSEPIDAYEMH 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,046
Number of Sequences: 438
Number of extensions: 3324
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)