Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C17
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical...   252   1e-67
AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotei...   252   1e-67
U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical pr...   140   8e-34
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    29   3.1  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    29   3.1  
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co...    28   5.3  
AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine re...    27   7.0  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    27   9.3  

>AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical
           protein Y111B2A.15 protein.
          Length = 380

 Score =  252 bits (617), Expect = 1e-67
 Identities = 112/187 (59%), Positives = 150/187 (80%)
 Frame = +1

Query: 1   LEQAGVSRAVLDNAIAAFCLEVIVRHGEPAPRLCNKDPLVLKMGTYVLELFPNAKFVFMV 180
           L+QAGV+  V++NAI++F +E++V HG+ APRLCNKDP  +K   Y+ ELFPNAK++ M+
Sbjct: 124 LQQAGVTGEVINNAISSFIMEIMVGHGDRAPRLCNKDPFTMKSAVYLKELFPNAKYLLMI 183

Query: 181 RDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAVELMYQQCKSLGPARCLTVRYEELV 360
           RDGRATV+SII+RKVTITGFDL+ +RQC++KWN A+++M  QC+S+G   CL V YE+LV
Sbjct: 184 RDGRATVNSIISRKVTITGFDLNDFRQCMTKWNAAIQIMVDQCESVGEKNCLKVYYEQLV 243

Query: 361 LRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVALSNVERSSDQVVRPVNLDALDKWV 540
           L P   +R +++FL + WD+ VLHHE+ I +   ++LSNVERSSDQVV+PVNLDAL KWV
Sbjct: 244 LHPEAQMRRITEFLDIPWDDKVLHHEQLIGK--DISLSNVERSSDQVVKPVNLDALIKWV 301

Query: 541 GQIPSDV 561
           G IP DV
Sbjct: 302 GTIPEDV 308


>AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotein
           sulfotransferase-A protein.
          Length = 380

 Score =  252 bits (617), Expect = 1e-67
 Identities = 112/187 (59%), Positives = 150/187 (80%)
 Frame = +1

Query: 1   LEQAGVSRAVLDNAIAAFCLEVIVRHGEPAPRLCNKDPLVLKMGTYVLELFPNAKFVFMV 180
           L+QAGV+  V++NAI++F +E++V HG+ APRLCNKDP  +K   Y+ ELFPNAK++ M+
Sbjct: 124 LQQAGVTGEVINNAISSFIMEIMVGHGDRAPRLCNKDPFTMKSAVYLKELFPNAKYLLMI 183

Query: 181 RDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAVELMYQQCKSLGPARCLTVRYEELV 360
           RDGRATV+SII+RKVTITGFDL+ +RQC++KWN A+++M  QC+S+G   CL V YE+LV
Sbjct: 184 RDGRATVNSIISRKVTITGFDLNDFRQCMTKWNAAIQIMVDQCESVGEKNCLKVYYEQLV 243

Query: 361 LRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVALSNVERSSDQVVRPVNLDALDKWV 540
           L P   +R +++FL + WD+ VLHHE+ I +   ++LSNVERSSDQVV+PVNLDAL KWV
Sbjct: 244 LHPEAQMRRITEFLDIPWDDKVLHHEQLIGK--DISLSNVERSSDQVVKPVNLDALIKWV 301

Query: 541 GQIPSDV 561
           G IP DV
Sbjct: 302 GTIPEDV 308


>U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical
           protein F42G9.8 protein.
          Length = 259

 Score =  140 bits (338), Expect = 8e-34
 Identities = 66/179 (36%), Positives = 105/179 (58%)
 Frame = +1

Query: 1   LEQAGVSRAVLDNAIAAFCLEVIVRHGEPAPRLCNKDPLVLKMGTYVLELFPNAKFVFMV 180
           +  +G+++ V D+A++AF  E++ +H E APRLCNKDP        +  L+PNAKF+ M+
Sbjct: 35  VNNSGITQEVFDDAVSAFITEIVAKHSELAPRLCNKDPYTALWLPTIRRLYPNAKFILMI 94

Query: 181 RDGRATVHSIITRKVTITGFDLSSYRQCLSKWNHAVELMYQQCKSLGPARCLTVRYEELV 360
           RD RA VHS+I RKV + G++ S       +WN  +  M  QC +  P +C+ V YE L+
Sbjct: 95  RDARAVVHSMIERKVPVAGYNTSDEISMFVQWNQELRKMTFQCNN-APGQCIKVYYERLI 153

Query: 361 LRPRDTLRGVSQFLGLRWDEAVLHHERYINQPNGVALSNVERSSDQVVRPVNLDALDKW 537
            +P + +  ++ FL L + + +L H+  I   + V L++ E S+ QV   +N  AL  W
Sbjct: 154 QKPAEEILRITNFLDLPFSQQMLRHQDLIG--DEVDLNDQEFSASQVKNSINTKALTSW 210


>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical protein
            F16B12.6 protein.
          Length = 1392

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 243  VEPGYSHLTGDDGVHGGASVAHHEHELRIREQLEH--VRAHLQHERVLVAE 97
            VE G  ++  +  VH G  +  HE   R  E +EH  V+ HL+HE +   E
Sbjct: 1338 VEEGVEYMQEELVVHPGNHLVGHEELGRHEEHIEHPEVQGHLEHEVIEAPE 1388


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 180 HHEHELRIREQLEHVRAHLQHERVLVAEPRRWLPVAHYHLQAERGDRVVQ 31
           +HE  +R+R  +EH R H  +  V+  EP   LP   Y +   + ++V +
Sbjct: 533 YHEEFIRVRPIIEHQRFHRCYTSVITEEP---LPNPFYWVHRGQWEKVYE 579


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 180 HHEHELRIREQLEHVRAHLQHERVLVAEPRRWLPVAHYHLQAERGDRVVQ 31
           +HE  +R+R  +EH R H  +  V+  EP   LP   Y +   + ++V +
Sbjct: 533 YHEEFIRVRPIIEHQRFHRCYTSVITEEP---LPNPFYWVHRGQWEKVYE 579


>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
            protein protein7 protein.
          Length = 1217

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -1

Query: 158  FGNSSSTYVPIFSTSGSLLQSRGAGSPWRTITSRQNAAIALSS 30
            FG  SS+ +P FSTS S   S  +G P  T T   NA    +S
Sbjct: 1050 FGGPSSSSIPAFSTSNS---SSTSGFPSSTATPFGNAGTTSTS 1089


>AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 64 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +1

Query: 187 GRATVHSIITRKVTITGFD--LSSYRQCLSKWNHAVELMYQQCKSLGPARCLTVRYEELV 360
           G   +H++  R + +  FD  +   R  L  W++ V L+Y   K +     L V  E   
Sbjct: 104 GLINLHTLYYRTICLKSFDPKMIKRRNLLFFWHYLVPLVYLAIKFIPSPDHLAVHNETRT 163

Query: 361 LRP 369
           L P
Sbjct: 164 LHP 166


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 200 TVARPSRTMNTNFAFGNSSSTYVPIFSTSGSLLQSRGAGSPWRTITSRQNAAIALSSTAR 21
           T   P  T+ T      +S++   + +T+G+   +    S  +T+TS Q    + S+ ++
Sbjct: 360 TTTMPVTTVQTTVTSIGTSTSPQAVVTTTGNPTTTAQLSSSSKTLTSTQTTQGSPSTVSQ 419

Query: 20  DTPACS 3
            TP  S
Sbjct: 420 TTPGVS 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,638,467
Number of Sequences: 27780
Number of extensions: 196781
Number of successful extensions: 747
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)