Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_C16
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 33 0.35
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 33 0.35
BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein DK... 31 1.9
AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein. 31 1.9
L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit ... 29 7.6
AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein. 29 7.6
AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein. 29 7.6
AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein. 29 7.6
AL139344-5|CAO03589.1| 154|Homo sapiens regulator of G-protein ... 29 10.0
AF205888-1|AAF22799.1| 777|Homo sapiens AXIN2 protein. 29 10.0
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 29 10.0
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFWSLPAKGTLTPA 206
T PG S+ T T S +TP++++ + V S A+T ++ ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTV-STSTTAITSHFTT-SETAVTPT 367
Query: 205 PEVPLELSVRAPCASLRTL 149
P P LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFWSLPAKGTLTPA 206
T PG S+ T T S +TP++++ + V S A+T ++ ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTV-STSTTAITSHFTT-SETAVTPT 367
Query: 205 PEVPLELSVRAPCASLRTL 149
P P LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein
DKFZp762E1312 protein.
Length = 748
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ90328 fis, clone NT2RP2001921. ).
Length = 748
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein.
Length = 748
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit
protein.
Length = 1025
Score = 29.1 bits (62), Expect = 7.6
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +3
Query: 120 YEEPELLTSSRVRRDAHGALT----LNSNGTSGAGVKVPFAGNDQNIVSAIGSLDLTNRQ 287
+ +P++LT + A+ LN +G + + VPFAG DQ G + + N
Sbjct: 333 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 387
Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAG*VNLFHNDXHDITAKAFAT 455
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 388 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 437
>AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 29.1 bits (62), Expect = 7.6
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +3
Query: 120 YEEPELLTSSRVRRDAHGALT----LNSNGTSGAGVKVPFAGNDQNIVSAIGSLDLTNRQ 287
+ +P++LT + A+ LN +G + + VPFAG DQ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAG*VNLFHNDXHDITAKAFAT 455
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 29.1 bits (62), Expect = 7.6
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +3
Query: 120 YEEPELLTSSRVRRDAHGALT----LNSNGTSGAGVKVPFAGNDQNIVSAIGSLDLTNRQ 287
+ +P++LT + A+ LN +G + + VPFAG DQ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAG*VNLFHNDXHDITAKAFAT 455
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein.
Length = 1063
Score = 29.1 bits (62), Expect = 7.6
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = +3
Query: 120 YEEPELLTSSRVRRDAHGALT----LNSNGTSGAGVKVPFAGNDQNIVSAIGSLDLTNRQ 287
+ +P++LT + A+ LN +G + + VPFAG DQ G + + N
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425
Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAG*VNLFHNDXHDITAKAFAT 455
K G T + GV + GFG T G ++ ND D+ AF T
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGT 475
>AL139344-5|CAO03589.1| 154|Homo sapiens regulator of G-protein
signalling like 1 protein.
Length = 154
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 152 SPEGRARSSHAQLQWYLWCW 211
SPEG AR S + W+ WCW
Sbjct: 97 SPEGEARVSLLKSNWW-WCW 115
>AF205888-1|AAF22799.1| 777|Homo sapiens AXIN2 protein.
Length = 777
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 22 CSGRSSFYCLSLCASAFKADT*LSANLFTIFNTMRSLNY*QALESGGTR 168
C G S +YC S C S KA + + F +T ++ A S G R
Sbjct: 542 CPGGSEYYCYSKCKSHSKAPETMPSEQFGAQSTKKAYPLESARSSPGER 590
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 28.7 bits (61), Expect = 10.0
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -1
Query: 334 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFWSLPAKG-TLTPAPEVPLELSVRAPCASL 158
P T TP + PSF V + PI++ + P TL P P + P S
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551
Query: 157 RTLELVNSSGSS 122
+ V ++ S+
Sbjct: 552 SVISTVTTNASA 563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,209,966
Number of Sequences: 237096
Number of extensions: 1420123
Number of successful extensions: 4988
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4988
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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