Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_C16
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 0.92
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 28 3.7
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical pr... 27 6.5
U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein. 27 6.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 6.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 6.5
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 6.5
Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 0.92
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 258 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 380
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESGGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESGGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>Z82096-2|CAB05032.1| 211|Caenorhabditis elegans Hypothetical
protein ZK909.4 protein.
Length = 211
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 274 KSKEPIALTIFWSLPAKGTLTPAPEVPLELSVRAPCASLRTLELVNSSGSS 122
K P+ + F SLP LTP ++ LE + A S R+ + +S SS
Sbjct: 47 KLDTPLGILPFDSLPTTNLLTPTKKIKLEDELCASPVSSRSSTVSSSHFSS 97
>U60979-1|AAC47277.1| 211|Caenorhabditis elegans CES-2 protein.
Length = 211
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 274 KSKEPIALTIFWSLPAKGTLTPAPEVPLELSVRAPCASLRTLELVNSSGSS 122
K P+ + F SLP LTP ++ LE + A S R+ + +S SS
Sbjct: 47 KLDTPLGILPFDSLPTTNLLTPTKKIKLEDELCASPVSSRSSTVSSSHFSS 97
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 257
T+SP P V TP T S +TP+V P+F V + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 78 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 179
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
>Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical
protein T28D6.7 protein.
Length = 322
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 389 CHLVSEPGDVCIRETYSVAVYIIQCHSSGCSA*FL 285
CH P CIR T ++ Y+I+ GC ++
Sbjct: 188 CHEDYPPAKGCIRATVLISGYLIKEKEQGCEVIYI 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,328,642
Number of Sequences: 27780
Number of extensions: 202013
Number of successful extensions: 566
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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