Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C15
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017212-1|AAH17212.2|  292|Homo sapiens PHF11 protein protein.        32   1.5  
AL139321-4|CAH71046.1|  168|Homo sapiens RP11-185C18.3 protein.        32   1.5  
AL139321-2|CAH71044.1|  331|Homo sapiens RP11-185C18.3 protein.        32   1.5  
AF155105-1|AAD42871.1|  191|Homo sapiens putative zinc finger pr...    32   1.5  
AB011031-1|BAA32101.1|  331|Homo sapiens BCAP protein.                 32   1.5  
BC044228-1|AAH44228.1|  200|Homo sapiens Similar to plexin A pro...    32   1.9  

>BC017212-1|AAH17212.2|  292|Homo sapiens PHF11 protein protein.
          Length = 292

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 512 LFYSQSTSIPFFPNCLLYNQGIFSLSGTNPF*PPLQFGI 396
           L+++QS +I    NCLLY+ G+      +P  P   F +
Sbjct: 18  LYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDV 56


>AL139321-4|CAH71046.1|  168|Homo sapiens RP11-185C18.3 protein.
          Length = 168

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 512 LFYSQSTSIPFFPNCLLYNQGIFSLSGTNPF*PPLQFGI 396
           L+++QS +I    NCLLY+ G+      +P  P   F +
Sbjct: 18  LYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDV 56


>AL139321-2|CAH71044.1|  331|Homo sapiens RP11-185C18.3 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 512 LFYSQSTSIPFFPNCLLYNQGIFSLSGTNPF*PPLQFGI 396
           L+++QS +I    NCLLY+ G+      +P  P   F +
Sbjct: 57  LYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDV 95


>AF155105-1|AAD42871.1|  191|Homo sapiens putative zinc finger
           protein NY-REN-34 antigen protein.
          Length = 191

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 512 LFYSQSTSIPFFPNCLLYNQGIFSLSGTNPF*PPLQFGI 396
           L+++QS +I    NCLLY+ G+      +P  P   F +
Sbjct: 18  LYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDV 56


>AB011031-1|BAA32101.1|  331|Homo sapiens BCAP protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 512 LFYSQSTSIPFFPNCLLYNQGIFSLSGTNPF*PPLQFGI 396
           L+++QS +I    NCLLY+ G+      +P  P   F +
Sbjct: 57  LYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDV 95


>BC044228-1|AAH44228.1|  200|Homo sapiens Similar to plexin A
           protein.
          Length = 200

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 545 CFLPHPKLNTWLFYSQSTSIPFFPNCLLYNQGIFSLSGTN 426
           CFLPHP L  ++    S  + F+ N L   Q +F +  T+
Sbjct: 25  CFLPHPTLTVFVTLPHSLPLRFWVNILKNPQFVFDIDKTD 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,249,865
Number of Sequences: 237096
Number of extensions: 2099499
Number of successful extensions: 6316
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6316
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)