Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C11
         (321 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-4|CAA22094.2|  827|Caenorhabditis elegans Hypothetical ...    32   0.080
AL132853-3|CAB60438.1|  859|Caenorhabditis elegans Hypothetical ...    29   0.56 
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    29   0.99 
Z81041-1|CAB02786.2|  362|Caenorhabditis elegans Hypothetical pr...    28   1.7  
Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical pr...    27   2.3  
AL021487-6|CAA16361.2|  325|Caenorhabditis elegans Hypothetical ...    27   2.3  
AC006748-1|AAF60514.2|  323|Caenorhabditis elegans Serpentine re...    27   2.3  
Z81589-10|CAB04718.2|  182|Caenorhabditis elegans Hypothetical p...    26   7.0  
Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical pr...    26   7.0  
AY559748-1|AAS72410.1|  671|Caenorhabditis elegans heat shock tr...    26   7.0  
AY559747-1|AAS72409.1|  671|Caenorhabditis elegans heat shock tr...    26   7.0  
AL033536-5|CAA22146.1|  671|Caenorhabditis elegans Hypothetical ...    26   7.0  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    25   9.2  
U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine rece...    25   9.2  
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho...    25   9.2  
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi...    25   9.2  
AF026208-2|AAB71269.3|  774|Caenorhabditis elegans Prion-like-(q...    25   9.2  

>AL033514-4|CAA22094.2|  827|Caenorhabditis elegans Hypothetical
           protein Y75B8A.3 protein.
          Length = 827

 Score = 32.3 bits (70), Expect = 0.080
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -1

Query: 273 GQQSENQWSNLETLGQQTQNQWDKVENAGQQIQNK 169
           GQQ  NQ+ N  T GQQT NQ+ + +  GQQ  N+
Sbjct: 473 GQQVNNQYQN--TQGQQTNNQY-QYDQGGQQTNNQ 504


>AL132853-3|CAB60438.1|  859|Caenorhabditis elegans Hypothetical
           protein Y80D3A.7 protein.
          Length = 859

 Score = 29.5 bits (63), Expect = 0.56
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 291 DKLEKIGQQSENQ-WSNLETLGQQTQNQWDKVENA 190
           ++ +K+G   E + W  ++T+GQ +  QW K+  A
Sbjct: 382 NEYQKLGDSKEEKTWDIIKTMGQWSDRQWHKLAGA 416



 Score = 26.6 bits (56), Expect = 4.0
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 318 LGQQTQNK-WDKLEKIGQQSENQWSNL 241
           LG   + K WD ++ +GQ S+ QW  L
Sbjct: 387 LGDSKEEKTWDIIKTMGQWSDRQWHKL 413


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 165 PIYFEFVALHFLLCPIDFVSVVLRFLNYST--DFHFVVLFFLIYPIYSVFV 311
           P +      H LL  I   S++  FLNYS    FHF +     +   S F+
Sbjct: 23  PAFLLVKLYHILLSVISMGSIIYFFLNYSNLLAFHFNIKILFFFQFCSCFL 73


>Z81041-1|CAB02786.2|  362|Caenorhabditis elegans Hypothetical
           protein C27A7.2 protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 102 VFVRQNYSIGSGLVGLNLLIDPIYFE 179
           + + QN  +GS  + LN++ID I F+
Sbjct: 9   IILHQNRKLGSNAIALNIVIDSINFD 34


>Z35595-5|CAA84636.1|  952|Caenorhabditis elegans Hypothetical
           protein C01G6.5 protein.
          Length = 952

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 291 DKLEKIGQQSENQWSNLETLGQQTQNQWDK 202
           DK EK G ++E    + E  G+QTQN+ DK
Sbjct: 537 DKDEKGGTETETPTPSPEDHGRQTQNKIDK 566


>AL021487-6|CAA16361.2|  325|Caenorhabditis elegans Hypothetical
           protein Y45F10B.11 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 19/79 (24%), Positives = 35/79 (44%)
 Frame = +3

Query: 72  LKNFNNATYVVFVRQNYSIGSGLVGLNLLIDPIYFEFVALHFLLCPIDFVSVVLRFLNYS 251
           +KN  N+  V    Q   +   L  L++L   I+     L F++ P  + +  +    Y 
Sbjct: 232 MKNQRNSALV----QKAELSLSLTTLSMLFSFIFHFVGGLIFIINPY-YTAYFIALRPYG 286

Query: 252 TDFHFVVLFFLIYPIYSVF 308
            D  FVV+ ++ Y  + +F
Sbjct: 287 NDIEFVVVPWIFYSTHPIF 305


>AC006748-1|AAF60514.2|  323|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 66 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +3

Query: 159 IDPIYFEFV---ALHFLLCPIDFVSVVLRFLNYSTDFHFVVLFFLIYPIYSVFVV 314
           +DP Y+ F     ++FLLC   F+++ +   N++T      + FL+YP  +   +
Sbjct: 1   MDPSYYFFHYYWPIYFLLCSSLFLAMFILIYNFTTPI-LKPMRFLLYPANAAMTI 54


>Z81589-10|CAB04718.2|  182|Caenorhabditis elegans Hypothetical
           protein T08G5.3 protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 185 CPAF-STLSH*FCVCCPKVSKLLH*FSLCCPIFSNLSHLFCV 307
           CP F   +++   V C + + ++  F+ C P  +NL+ + CV
Sbjct: 85  CPDFPEAVTNELDVMCSRFNFIIEKFTDCVPKLNNLTEIECV 126


>Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical
           protein F57A8.4 protein.
          Length = 396

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
 Frame = +3

Query: 51  TIKCTIYLKNFNNATYVVFVRQNY-SIGSGLVGLNLLIDPIYFEFVALHFLLCPI----D 215
           TI+  I +   N+  +++     + +IG   +G+ +L  P +FE+   +   CP+    D
Sbjct: 130 TIERFIVVAEINSLDFLISSTGRFVTIGITFLGVAILRLPAFFEYFITYRPDCPLYENYD 189

Query: 216 FVSVVLRFLNYSTDFHFVVLFFL-IYPIYSVFVVPN 320
           +  ++  + +Y   F+F V+  L I+  +++ ++ N
Sbjct: 190 YTPILASWEHYQM-FNFYVMTVLHIFVPFALLLMLN 224


>AY559748-1|AAS72410.1|  671|Caenorhabditis elegans heat shock
           transcription factor 1 protein.
          Length = 671

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = -1

Query: 312 QQTQNKWDKLEKIGQQSENQWSNLETLGQQTQNQ 211
           ++ +N  DK+ K+ +++ + W+ + ++ QQ   Q
Sbjct: 225 EKAKNMEDKMNKLTKENRDMWTQMGSMRQQHARQ 258


>AY559747-1|AAS72409.1|  671|Caenorhabditis elegans heat shock
           transcription factor 1 protein.
          Length = 671

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = -1

Query: 312 QQTQNKWDKLEKIGQQSENQWSNLETLGQQTQNQ 211
           ++ +N  DK+ K+ +++ + W+ + ++ QQ   Q
Sbjct: 225 EKAKNMEDKMNKLTKENRDMWTQMGSMRQQHARQ 258


>AL033536-5|CAA22146.1|  671|Caenorhabditis elegans Hypothetical
           protein Y53C10A.12 protein.
          Length = 671

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = -1

Query: 312 QQTQNKWDKLEKIGQQSENQWSNLETLGQQTQNQ 211
           ++ +N  DK+ K+ +++ + W+ + ++ QQ   Q
Sbjct: 225 EKAKNMEDKMNKLTKENRDMWTQMGSMRQQHARQ 258


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -1

Query: 309  QTQNKWDKLEKIGQQSEN-QWSNLETL 232
            +TQ K+D+LE++ +QS+  Q SN E +
Sbjct: 1346 ETQEKYDELEQVYEQSQQAQNSNKELI 1372


>U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 16 protein.
          Length = 342

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 156 LIDPIYFEFVALHFLLCPIDFVSVVLRFLNYSTD 257
           L+  +YF     H  L    ++ ++ RFL+Y TD
Sbjct: 58  LLLTMYFFAAIFHSFLFTASYLMMIERFLDYQTD 91


>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
           homolog protein.
          Length = 1257

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 291 DKLEKIGQQSENQWSNLETLGQQTQNQ 211
           +K+EK+   +E +W NLETL   + NQ
Sbjct: 255 NKIEKLNM-TEGEWENLETL-NMSHNQ 279


>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
           flightless) homologprotein 1 protein.
          Length = 1257

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 291 DKLEKIGQQSENQWSNLETLGQQTQNQ 211
           +K+EK+   +E +W NLETL   + NQ
Sbjct: 255 NKIEKLNM-TEGEWENLETL-NMSHNQ 279


>AF026208-2|AAB71269.3|  774|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 40
           protein.
          Length = 774

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 270 QQSENQWSNLETLGQQTQNQWDKVENAGQQ 181
           QQ +  ++     GQQTQN W +  N   Q
Sbjct: 444 QQQQFYYTQAPFYGQQTQNYWGQQNNQYNQ 473


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,653,846
Number of Sequences: 27780
Number of extensions: 94338
Number of successful extensions: 320
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)