Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C08
         (267 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.00 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   1.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   1.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   5.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   7.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    19   9.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.00
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
 Frame = -3

Query: 205 FTLSSATPAVAAPSFCLLVKSKEPIALTI----FLSLPAKGTLTPAPEVPSELSVR-APC 41
           F   S + AV  P   L V+     A  +       LP+ GT +P P+    ++   AP 
Sbjct: 36  FAAPSTSTAVQRPQAILQVRPSTSAAADVDGWQVTPLPSDGTTSPEPDPEIPVAPEPAPL 95

Query: 40  AS 35
           AS
Sbjct: 96  AS 97


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 41  ARSSHAQLRWYLWCWS*STLCW 106
           AR  HA+     WC+     CW
Sbjct: 572 ARGIHAEALVPRWCYQNEGECW 593


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 97   GTLTPAPEVPSELSVRAPCASL 32
            GT+ PA E+P E + +   A+L
Sbjct: 1587 GTIAPAREIPKEDTFQIILANL 1608


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 54  TLNSDGTSGAGVKVPFAGNDKN 119
           TL S G +  G+K+  + NDK+
Sbjct: 176 TLLSIGETAMGIKLNASDNDKD 197


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 54  TLNSDGTSGAGVKVPFAGNDKN 119
           TL S G +  G+K+  + NDK+
Sbjct: 176 TLLSIGETAMGIKLNASDNDKD 197


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 186 VALDNVNGHGVSLTDTHIPGFG 251
           V  +++NG    LTD H   +G
Sbjct: 184 VTFNSLNGAHTPLTDDHDEKYG 205


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 71  TIGVERESSVRVPADSR 21
           T+G +++ +VR+  D+R
Sbjct: 346 TVGKKKDGTVRICLDAR 362


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 137 TDSAYYILVVTSKGYFNSSTRGTIGV 60
           T SA+Y  V ++  YF   T+  + V
Sbjct: 344 TLSAHYFPVFSACDYFTIETKTVLDV 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,661
Number of Sequences: 336
Number of extensions: 960
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4378513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)