SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C08
         (267 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1455 + 27230134-27231110,27231195-27231327,27231417-272315...    31   0.096
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97...    28   0.89 
02_03_0247 - 16809742-16809780,16810070-16810298,16810381-168105...    28   1.2  
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417...    27   1.6  
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724...    27   2.1  
03_06_0262 + 32730927-32731634,32731713-32732159,32732247-327331...    27   2.1  
01_01_0070 - 542603-542686,542803-543441                               27   2.1  
07_03_0342 + 16963528-16963598,16963668-16964235,16964350-169647...    27   2.7  
05_04_0113 + 18085705-18085833,18086442-18086885                       27   2.7  
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119...    26   3.6  
10_03_0036 - 7286425-7286463,7286686-7286974,7287306-7288192,728...    26   3.6  
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190...    26   3.6  
09_03_0084 + 12198185-12198460,12198560-12198700,12198782-121991...    26   3.6  
03_01_0410 - 3166651-3166815,3166901-3167218,3167305-3167652           26   4.8  
11_04_0039 + 12679350-12680057,12680136-12680582,12680670-126815...    25   6.3  
10_02_0064 + 4863861-4864145,4864441-4864464,4864665-4864685           25   6.3  
05_04_0434 - 21188640-21188963                                         25   6.3  
01_06_1365 - 36690267-36692222                                         25   6.3  
01_02_0130 - 11424904-11425142,11425295-11425416,11425461-114255...    25   6.3  
11_03_0217 - 11828305-11828343,11828449-11828487,11828573-118288...    25   8.3  
11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504,439...    25   8.3  
10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142     25   8.3  
09_02_0476 + 9728729-9730739,9730930-9730991                           25   8.3  
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314...    25   8.3  
06_03_0039 + 15791968-15792036,15793317-15793847,15799797-158001...    25   8.3  
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647...    25   8.3  
03_04_0001 - 16208401-16208778                                         25   8.3  
03_01_0178 + 1437263-1438017,1438754-1438858,1438950-1439072,143...    25   8.3  
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717...    25   8.3  
01_01_0809 + 6294991-6295044,6295099-6296334                           25   8.3  

>08_02_1455 +
           27230134-27231110,27231195-27231327,27231417-27231501,
           27233372-27233571
          Length = 464

 Score = 31.5 bits (68), Expect = 0.096
 Identities = 25/71 (35%), Positives = 32/71 (45%)
 Frame = -3

Query: 247 NPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVP 68
           +PG    V  +P P  LSSA  A AA S+  L  S  P A       P     +P P++P
Sbjct: 17  SPGQPPVVPRSPTPLDLSSAAAAAAAASYRRLSPSLRPPA------HPQARLPSPYPQIP 70

Query: 67  SELSVRAPCAS 35
           S  S  A  +S
Sbjct: 71  SSSSAAAAGSS 81


>09_01_0066 -
           978018-978500,978588-979034,979113-979412,979521-979855,
           980325-980703
          Length = 647

 Score = 28.3 bits (60), Expect = 0.89
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  L   P ++ SA   +  P+ C L+    P     F  L A+G    P PE     
Sbjct: 467 CASTELAENPTSVDSAVDHITEPTSCTLIVRVMP----TFTVLAAEGLAYKPTPETRVHG 522

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 523 AQLRADCAKVQ 533


>02_03_0247 -
           16809742-16809780,16810070-16810298,16810381-16810551,
           16810630-16811516,16811604-16812050,16812129-16812836
          Length = 826

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  L   P ++ SA   +  P+ C L     P     F  L A+G    P PE     
Sbjct: 365 CASTELAENPTSIDSAVDHITEPTSCTLTVRVMP----TFTVLAAEGLAYKPTPETTVHG 420

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 421 AQLRADCAKVQ 431


>03_05_0520 +
           25139314-25139364,25139580-25139711,25141594-25141731,
           25143191-25143241,25143662-25143751,25143854-25144000,
           25144108-25144218,25144307-25144375,25144777-25145517,
           25145840-25146004,25146376-25146442,25146580-25146704,
           25148714-25148983,25149065-25149199,25149316-25149497,
           25149669-25149744
          Length = 849

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 208 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPE-VPSELSVRAPCASL 32
           P T+S++T AV+  +  +    +  +  T    LPA  T   APE +P+  S  AP  S 
Sbjct: 310 PTTISTSTAAVSVSAETISSPVRPIVPTTTAAVLPASVTARSAPENIPAVTS--APANSS 367

Query: 31  RTLE 20
            TL+
Sbjct: 368 STLK 371


>09_02_0322 -
           7240125-7241568,7242043-7243253,7245782-7246144,
           7246502-7246522
          Length = 1012

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 112 SLPAKGTLTPAPEVPSELSVRAP 44
           S+P + +L PAP   S+L V AP
Sbjct: 870 SIPVQNSLPPAPPSASQLQVHAP 892


>03_06_0262 +
           32730927-32731634,32731713-32732159,32732247-32733133,
           32733212-32733382,32733465-32733753,32733839-32733877,
           32733983-32734021
          Length = 859

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  L   P ++ SA   +  P+ C L     P     F  L A+G    P PE     
Sbjct: 365 CASTELAENPTSVDSAVDHITEPTSCTLTVRVMP----TFTVLAAEGLAYKPTPETRVHG 420

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 421 AQLRADCAKVQ 431


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
 Frame = -3

Query: 220 LTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIF--LSLPAKGTLTPAPEVPSEL-SVR 50
           +TP P T    +P  A P   L   +  P+A       +LP   T  P  E P+EL    
Sbjct: 100 VTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPATTPPPVAEAPAELPPAE 159

Query: 49  APCASLRTLELVNSSG 2
           AP  S       N  G
Sbjct: 160 APTKSKNKHRKKNKRG 175


>07_03_0342 +
           16963528-16963598,16963668-16964235,16964350-16964760,
           16964848-16965051,16968663-16969032,16972466-16972601,
           16972680-16972779,16972933-16973190,16973276-16973314,
           16973420-16973458
          Length = 731

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLT--PAPEVPSE 62
           C S  L   P ++ SA   +  P+ C L     P   T   ++PA   L   P PE    
Sbjct: 330 CASTELAENPTSVDSAVDHITEPTSCTLTVRVMP---TFTFTVPAAEGLAYKPTPETRVH 386

Query: 61  -LSVRAPCA 38
              +RA CA
Sbjct: 387 GAQLRADCA 395


>05_04_0113 + 18085705-18085833,18086442-18086885
          Length = 190

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
 Frame = +3

Query: 15  TSSRVRRDAHGALTLNSD-------GTSGAGVKVPFAGNDKNIVSAIGSLDL--TNRQKL 167
           TS+R R    G LT+ ++       G  GAG ++P AG D    +  G   +  ++   +
Sbjct: 36  TSTRKRLVGSGKLTIVAEIPRLALGGGGGAGERLPAAGEDSAAATNTGKCQVVGSSLAAM 95

Query: 168 GAATAGVALD 197
            AA+AG+  D
Sbjct: 96  VAASAGIQPD 105


>11_06_0759 +
           27008772-27009571,27010457-27010576,27011683-27011957,
           27012516-27013783
          Length = 820

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 69  GTSG--AGVKVPFAGNDKNIVSAIGSLDLT 152
           G SG   GVK P  GN    +  +GS+D T
Sbjct: 531 GQSGFHGGVKFPVGGNPSKSLKVLGSIDST 560


>10_03_0036 -
           7286425-7286463,7286686-7286974,7287306-7288192,
           7288280-7288726,7288805-7288830,7288984-7289512
          Length = 738

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  LT  P ++ SA   +  P+ C L     P     F    A+G    P PE     
Sbjct: 314 CASTELTENPTSVDSAVDYITEPTSCTLTVRVMP----TFTVPAAEGLAYKPTPETRVHG 369

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 370 AQLRADCAKVQ 380


>10_01_0169 -
           1899491-1899666,1901358-1901638,1902468-1902477,
           1902696-1902786,1903993-1904031,1904117-1904405,
           1904488-1904658,1904737-1905623,1905711-1906157,
           1906236-1906460,1906536-1906943
          Length = 1007

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  L   P  + SA   +  P+ C L     P     F  L A+G    P PE     
Sbjct: 340 CASTELAENPTLVDSAVDHITEPTSCTLTVRVMP----TFTVLAAEGLAYKPTPETRVHG 395

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 396 AQLRADCAKVQ 406


>09_03_0084 +
           12198185-12198460,12198560-12198700,12198782-12199114,
           12199197-12199344,12199424-12199494,12199709-12199801,
           12200412-12200486,12200529-12200540
          Length = 382

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 228 P*DLLRGRLHYPVPLQRLQRL 166
           P +L +  +HYP+P QR  RL
Sbjct: 352 PAELKKSSVHYPLPAQRSNRL 372


>03_01_0410 - 3166651-3166815,3166901-3167218,3167305-3167652
          Length = 276

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 150 TNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGDXVT 263
           +  +++G      A D     GV+++DT +PG G  VT
Sbjct: 73  SRNEEMGVVGHDQATDAAAEQGVNVSDTLVPGGGRIVT 110


>11_04_0039 +
           12679350-12680057,12680136-12680582,12680670-12681556,
           12681635-12681805,12681872-12682160,12682390-12682428
          Length = 846

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSE- 62
           C S  L   P ++ SA   +  P+ C L      + LT F  L  +G    P PE     
Sbjct: 365 CASTELAENPTSVDSAVDHITEPTSCTLTVR---VMLT-FTVLATEGLAYKPTPETRVHG 420

Query: 61  LSVRAPCASLR 29
             +RA CA ++
Sbjct: 421 AQLRADCAKVQ 431


>10_02_0064 + 4863861-4864145,4864441-4864464,4864665-4864685
          Length = 109

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 182 WSGTG*CKRPRSKSHGYTH 238
           W   G CK     SHGY H
Sbjct: 59  WLADGGCKGKMDNSHGYNH 77


>05_04_0434 - 21188640-21188963
          Length = 107

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = +3

Query: 39  AHGALTLNSDGTSGAGVKVPFAGNDKNIVSA--IGSLDLTNR-QKLGAATAGVALDNVNG 209
           AHGA  L        G +V  AGN  NI+ +  +G  D       + +A+A    D   G
Sbjct: 19  AHGARVLEERMWRPVGARVVSAGNWPNILDSLPLGEPDFAGAGGPVASASASAGADGKKG 78

Query: 210 HG 215
            G
Sbjct: 79  SG 80


>01_06_1365 - 36690267-36692222
          Length = 651

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 95  YFNSSTRGTIGVERESSVRVPA 30
           Y +SSTR    +ER SSVR P+
Sbjct: 403 YLDSSTRRRRSLERSSSVRRPS 424


>01_02_0130 -
           11424904-11425142,11425295-11425416,11425461-11425546,
           11425642-11425858,11426788-11426832,11428385-11428593,
           11428706-11428936
          Length = 382

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -3

Query: 244 PGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIF-LSLPAKGTLTPAPE 74
           P   +SV    +P  +    P    P+   L K  +   LT   LS PA+GTL+  PE
Sbjct: 255 PSSWISVAWLSYPLDVGCRYPIYRIPTGPTL-KDLDACFLTFHSLSTPAEGTLSGHPE 311


>11_03_0217 -
           11828305-11828343,11828449-11828487,11828573-11828861,
           11828944-11829114,11829193-11830079,11830167-11830346,
           11830692-11831399
          Length = 770

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = -3

Query: 235 CVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLT--PAPEVPSE 62
           C S  L   P ++ S    +  P+ C L+     + + +  ++PA   L   P PE    
Sbjct: 276 CTSTELAENPTSVDSTVDHITKPTSCTLI-----VRVMLTFTVPAAEGLAYKPTPETRVH 330

Query: 61  -LSVRAPCASLR 29
              +RA CA ++
Sbjct: 331 GAQLRADCAKVQ 342


>11_01_0558 -
           4396750-4396986,4397699-4398050,4398266-4398504,
           4398608-4398709
          Length = 309

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 3   PELLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGND 113
           PEL+   R   DA G + L  D   G    +P  G D
Sbjct: 173 PELVDGLRAHTDAGGLILLFQDDRFGGLQMIPNRGGD 209


>10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142
          Length = 407

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -3

Query: 253 SPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPE 74
           SP+P      R    P   S A  A AA +  LL      + L + LSLP    L+P+P 
Sbjct: 16  SPSPFAPSRHRRKVAPAAASPAPAAAAAAARHLLRCLHLRLRLLLLLSLPTLYFLSPSPA 75

Query: 73  V 71
           +
Sbjct: 76  I 76


>09_02_0476 + 9728729-9730739,9730930-9730991
          Length = 690

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 60  NSDGTSGAGVKVPFAGNDKNIVSAIGSLDLT 152
           N D T GAG    +AG+   +  + G+ D T
Sbjct: 246 NGDATGGAGGFSSYAGDANTVAVSFGNYDHT 276


>07_01_0408 -
           3137705-3138017,3139361-3139371,3140693-3140770,
           3141105-3141206,3141309-3141380,3141484-3141558
          Length = 216

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -3

Query: 232 VSVRLTPWPFTLSSATP---AVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVP 68
           +S+ L P    +  ATP   AVAA +      ++   ALT  LS P + T + A   P
Sbjct: 36  ISLHLVP---VIRGATPFSSAVAAAAAAASTPARSSSALTQTLSFPIQATRSAATSTP 90


>06_03_0039 +
           15791968-15792036,15793317-15793847,15799797-15800105,
           15800256-15800772,15800964-15801163,15801303-15801398
          Length = 573

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 144 DLTNRQKLGAATAGVALDNVNGHGVSLT 227
           D+  R + G    GVAL+  NG  V LT
Sbjct: 85  DVIRRLQNGPDVRGVALEGENGRAVDLT 112


>04_01_0492 +
           6476586-6476873,6477414-6477686,6477769-6477948,
           6478436-6478696,6479171-6479303,6479404-6479494,
           6479921-6480023,6480557-6480660,6480809-6480902,
           6480985-6481140,6481224-6481286,6481388-6481453,
           6481670-6481870,6481999-6482076,6482165-6482284,
           6482382-6482462,6482548-6482633,6482920-6483031,
           6483093-6483170,6483306-6483482
          Length = 914

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 265 AVTXSPNPGMCVSVRLTPWPFTLSSATPAVAA 170
           A+T +P+    +   +  WP TL SA+P ++A
Sbjct: 514 ALTTNPSFHELLLTTVKKWPPTLYSASPVISA 545


>03_04_0001 - 16208401-16208778
          Length = 125

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = -3

Query: 220 LTPWPFTL---SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVR 50
           ++P P +L   + A+P   A +  L       +A T F +  + G L P P   + L+V 
Sbjct: 24  ISPLPLSLPLRAQASPEAVAVALVLPRADPAEVAATAFPTSGSGGPLPPPPSSQASLAVD 83

Query: 49  APCASLRT 26
              A+  T
Sbjct: 84  PTAAASPT 91


>03_01_0178 +
           1437263-1438017,1438754-1438858,1438950-1439072,
           1439908-1440078,1440163-1440292,1440372-1440581,
           1440675-1440773
          Length = 530

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +3

Query: 3   PELLTSSRVRRDAHGALTLNSDGTS---GAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGA 173
           P +L +   R  A   ++  + G S   GA  +   +G+    VS +G       ++L  
Sbjct: 154 PPVLPAGSTRSTAASGMSATTSGGSERDGATPRSTASGSAGPEVSHLGWGHWFTLRELEE 213

Query: 174 ATAGVALDNVNGHG 215
           AT G+A +NV G G
Sbjct: 214 ATDGLAEENVIGEG 227


>01_01_0911 -
           7176355-7176372,7176502-7176756,7177352-7177615,
           7177691-7177810,7177910-7178041,7178136-7178252,
           7178335-7178459,7178611-7178920,7179368-7179550,
           7179643-7179787,7180126-7181355,7181454-7181563,
           7181768-7182037,7182130-7182963
          Length = 1370

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = -3

Query: 247 NPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVP 68
           NP    S    P P T +  +PA AAP     + S  P A     S P+  ++     + 
Sbjct: 495 NPAASSSAPTPPPPATTTMDSPAAAAP---FKISSPSPDATVSQASAPSPTSVIAQASLD 551

Query: 67  SEL-SVRAPCASLRTLE 20
           S +  +RA  + L T E
Sbjct: 552 SAVGELRAAVSCLCTSE 568


>01_01_0809 + 6294991-6295044,6295099-6296334
          Length = 429

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +3

Query: 69  GTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTH 236
           G S AG  VP AG      S I +++ T  ++L     GVA+DN   H V+   TH
Sbjct: 155 GESYAGKYVPAAG------SYILAVNPTLPKRLRVNLHGVAIDNGLTHPVAQVATH 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,118,235
Number of Sequences: 37544
Number of extensions: 126802
Number of successful extensions: 493
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 67
effective length of database: 12,277,900
effective search space used: 257835900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -