Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_C08
(267 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 36 0.018
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 36 0.018
BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein DK... 31 0.66
AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens ... 31 0.66
AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein. 31 0.66
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 29 2.7
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 29 2.7
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 28 6.2
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 28 6.2
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein. 28 6.2
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 36.3 bits (80), Expect = 0.018
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -3
Query: 259 TXSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 80
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 79 PEVPSELSVRAPCASLRTL 23
P PS LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 36.3 bits (80), Expect = 0.018
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -3
Query: 259 TXSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 80
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367
Query: 79 PEVPSELSVRAPCASLRTL 23
P PS LS P SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386
>BC001940-1|AAH01940.2| 748|Homo sapiens hypothetical protein
DKFZp762E1312 protein.
Length = 748
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 226 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 134
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AK074809-1|BAC11221.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ90328 fis, clone NT2RP2001921. ).
Length = 748
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 226 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 134
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AB162218-1|BAD36741.1| 748|Homo sapiens hFLEG1 protein.
Length = 748
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 226 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 134
VR+TP P S A+PAV AP +C + K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin
protein.
Length = 877
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 91 LTPAPEVPSELSVRAPCASLRTL 23
+TP P PS LS P SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin
protein.
Length = 878
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 91 LTPAPEVPSELSVRAPCASLRTL 23
+TP P PS LS P SLRTL
Sbjct: 24 VTPTPVTPSSLSTDIPTTSLRTL 46
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = -3
Query: 259 TXSPNPGMCVSVRLTPW-PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTP 83
T P P S TP P + PA P KEP T PA T P
Sbjct: 417 TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP--KEPAPTTKEP 474
Query: 82 APEVPSELSVRAP 44
AP P E + AP
Sbjct: 475 APTTPKEPAPTAP 487
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = -3
Query: 259 TXSPNPGMCVSVRLTPW-PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTP 83
T P P S TP P + PA P KEP T PA T P
Sbjct: 417 TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTP--KEPAPTTKEP 474
Query: 82 APEVPSELSVRAP 44
AP P E + AP
Sbjct: 475 APTTPKEPAPTAP 487
>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
Length = 1156
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -3
Query: 208 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSELSVRAPCASL 32
P T TP + PSF V + PI++ + P TL P P + + P S
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551
Query: 31 RTLELVNSS 5
+ V ++
Sbjct: 552 SVISTVTTN 560
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,495,623
Number of Sequences: 237096
Number of extensions: 696507
Number of successful extensions: 1877
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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