Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_C07
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 233 5e-62
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 205 1e-53
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 204 2e-53
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 190 5e-49
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 188 2e-48
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 44 6e-05
04_04_0520 - 25871932-25872074,25872234-25872294,25873267-258733... 30 0.83
09_03_0051 + 11902322-11903125 30 1.1
11_03_0181 - 11301759-11301838,11302294-11303095 29 2.5
02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719 28 4.4
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 27 5.8
01_06_0344 - 28576568-28576699,28576881-28576961,28577036-285771... 27 5.8
04_03_0642 + 18289461-18290897,18291586-18291666 27 7.7
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 233 bits (570), Expect = 5e-62
Identities = 101/158 (63%), Positives = 131/158 (82%)
Frame = +2
Query: 2 KISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCLDYKRFRQIA 181
KISA SIFFE+MPY++D +TGLIDYD++ ++A LF+P++I+AG S Y+R DY R R++
Sbjct: 171 KISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAYARLYDYDRMRKVC 230
Query: 182 DENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKA 361
D+ A L+ADMAH+SGLVAAGV+PSPF++ D+VTTTTHK+LRGPR +IF+RKGV+ V
Sbjct: 231 DKQKAILLADMAHISGLVAAGVVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKGVNK 290
Query: 362 NGQKVMYDFEGKINQAVFPGLQGGPHNHAIAAIATAMK 475
G++VMYDFE KIN AVFPGLQGGPHNH I +A A+K
Sbjct: 291 QGKEVMYDFEDKINAAVFPGLQGGPHNHTITGLAVALK 328
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 205 bits (501), Expect = 1e-53
Identities = 97/159 (61%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 KISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCLDYKRFRQIA 181
KISATSI+FES+PYKV TG IDY+KL E A F+P++II G S Y R DY + R +A
Sbjct: 146 KISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSAYPRDWDYAKLRAVA 205
Query: 182 DENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVR-SVK 358
D+ GA L+ DMAH+SGLVAA +PFE+CD+VTTTTHK+LRGPRAG+IF+RKG + K
Sbjct: 206 DKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKK 265
Query: 359 ANGQKVMYDFEGKINQAVFPGLQGGPHNHAIAAIATAMK 475
+ +YD+E KIN AVFP LQGGPHNH IAA+A A++
Sbjct: 266 GQPEGAVYDYEDKINFAVFPSLQGGPHNHQIAALAVALQ 304
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 204 bits (499), Expect = 2e-53
Identities = 96/159 (60%), Positives = 121/159 (76%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 KISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCLDYKRFRQIA 181
KISATSI+FES+PYKV TG +DYDKL E A F+P++II G S Y R DY RFR IA
Sbjct: 99 KISATSIYFESLPYKVSSETGYVDYDKLEEKAMDFRPKLIICGGSAYPRDWDYARFRAIA 158
Query: 182 DENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVR-SVK 358
D+ GA L+ DMAH+SGLVAA +PF++ D+VTTTTHK+LRGPR+G+IF+RKG++ K
Sbjct: 159 DKCGAMLLCDMAHISGLVAAQEAANPFQYSDVVTTTTHKSLRGPRSGMIFYRKGLKPPKK 218
Query: 359 ANGQKVMYDFEGKINQAVFPGLQGGPHNHAIAAIATAMK 475
+ +YD+E +IN AVFP LQGGPHNH IAA+A +K
Sbjct: 219 GQPEGALYDYEDRINFAVFPSLQGGPHNHQIAALAVGLK 257
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 190 bits (463), Expect = 5e-49
Identities = 93/163 (57%), Positives = 115/163 (70%), Gaps = 5/163 (3%)
Frame = +2
Query: 2 KISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCLDYKRFRQIA 181
K+S SIFFES+ YKV+P TG IDYDKL E A F P+++I G S Y R D+ R R IA
Sbjct: 278 KVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPREWDFARMRLIA 337
Query: 182 DENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKA 361
D+ GA LM DMAH+SGLVAA SPF++CD+VT+TTHK LRGPR G+IFFR+G +
Sbjct: 338 DKCGAVLMCDMAHISGLVAAKECRSPFDYCDVVTSTTHKNLRGPRGGIIFFRRGKNLRRR 397
Query: 362 NG-----QKVMYDFEGKINQAVFPGLQGGPHNHAIAAIATAMK 475
G + YDFE +IN AVFP +QGGPHN+ IAA+A +K
Sbjct: 398 TGSFSQADENDYDFEDRINFAVFPSMQGGPHNNHIAALAITLK 440
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 188 bits (458), Expect = 2e-48
Identities = 92/164 (56%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
Frame = +2
Query: 2 KISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCLDYKRFRQIA 181
K+S SIFFE++ Y+V+P TG IDYDK+ E A F P+++I G S Y R DY R R +A
Sbjct: 248 KVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHPKILICGASSYPRDWDYARMRLVA 307
Query: 182 DENGAYLMADMAHVSGLVAAGVIPSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKA 361
D+ GA LM DMA +SGLVAA +PF++CDIVT+TTHK+LRGPR G+IFFRKG K
Sbjct: 308 DKCGAVLMCDMAQISGLVAAKECRNPFDYCDIVTSTTHKSLRGPRGGIIFFRKGKNLRKR 367
Query: 362 NG------QKVMYDFEGKINQAVFPGLQGGPHNHAIAAIATAMK 475
G + YDFE +IN AVFP +QGGPHN+ IAA+A A+K
Sbjct: 368 VGSLTQVVENDQYDFEDRINFAVFPSMQGGPHNNHIAALAIALK 411
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 254 SPFEHCDIVTTTTHKTLRGPRAGVIFFRKG 343
S F HCD+VT+T +K L GPR G IFFR+G
Sbjct: 1677 SLFNHCDVVTST-NKNLTGPRGGTIFFRRG 1705
>04_04_0520 -
25871932-25872074,25872234-25872294,25873267-25873389,
25873465-25873531,25873710-25873780,25873853-25874004,
25874082-25874158,25874323-25874435,25874503-25874598,
25874703-25874734,25874838-25874884,25875015-25875068,
25875212-25875289,25875607-25875698
Length = 401
Score = 30.3 bits (65), Expect = 0.83
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 346 NSLAEEYDPSARTPQCFVCSCCYDVTMFKRTWNYTCCNKA*HVCHVC 206
+ EE A+T C+ C D+T+FK+ Y N C VC
Sbjct: 119 DKFGEEMKKDAQTAGLHHCTYCLDLTIFKQAHYYEDDNAPTGTCAVC 165
>09_03_0051 + 11902322-11903125
Length = 267
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 396 FPSKSYITFCPFALTERTPLRKNMTPARGPRSVLCVVVVT-MSQCSKGLGITPAATRPDT 220
FPS S+ F P A RTP + +P P + T + S TP A RP+T
Sbjct: 74 FPSASFYAFHPDAAEPRTPTPRKRSPVAAPPAASEPQTPTPPPRPSVAAPDTPPAQRPET 133
>11_03_0181 - 11301759-11301838,11302294-11303095
Length = 293
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 251 PSPFEHCDIVTTTTHKTLRGPRAGVIFFRKGVRSVKANGQKVM 379
PSPFEH VT GP + F++G+R A+G V+
Sbjct: 157 PSPFEHVHGVTPLESTARLGPEDAAL-FQEGLRVYDASGFAVV 198
>02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719
Length = 256
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +1
Query: 301 TAGSSRWGHILPQGSSLGQSERAESDVRFRREDQPGRIPGASGRSSQPRHSRD 459
T WG L G E + + R+ PG + GA+ R +P +RD
Sbjct: 2 TPWMDEWGRRLSARRRSGDGEESAEEARW----MPGAVEGAAERGIEPSRARD 50
>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 358 SERAESDVRFRREDQPGRIPGASGRSSQPRHSRDSD 465
SER + R+D+P +P G S + RD D
Sbjct: 1224 SERTHGTLPCSRDDEPVHVPSDFGSSKSQDNQRDED 1259
>01_06_0344 -
28576568-28576699,28576881-28576961,28577036-28577131,
28578862-28579038,28579633-28580130
Length = 327
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 83 LAETAKLFKPRVIIAGMSCYSRCLDYK 163
L E +F+ RV++ GMS Y R D++
Sbjct: 222 LEEEIMMFQTRVLLGGMSMYDRYQDWR 248
>04_03_0642 + 18289461-18290897,18291586-18291666
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 134 SCYSRCLDYKRFRQIADENGAYLMADMAH 220
SC+ L+ F++ A E+G Y++ D+ H
Sbjct: 435 SCFDDLLNRSFFQKAAGEHGTYVIHDLMH 463
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,148,956
Number of Sequences: 37544
Number of extensions: 268259
Number of successful extensions: 814
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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