Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C06
         (330 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    43   5e-05
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    33   0.064
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    30   0.34 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   0.60 
AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical ...    27   3.2  
U80441-2|AAB37652.1|  139|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    26   5.5  
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    26   5.5  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    26   7.3  
AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical ...    26   7.3  
AF077536-10|AAK31408.2|  229|Caenorhabditis elegans Hypothetical...    25   9.7  
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    25   9.7  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +1

Query: 76  RIIGGAQTTIQTYPSVVALLFXXXXVFRQACGGCILNTRSVLTAAHCPFGD-AAARWRIR 252
           R+IGG++++  ++P  V LL     +    CGG +++   VLTAAHC   D     + +R
Sbjct: 57  RLIGGSESSPHSWPWTVQLL---SRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVR 113

Query: 253 LGSTAANSGGITRNVQRYIIHSSFN 327
           +G   + SG   R V    IH  +N
Sbjct: 114 VGGHRSGSGSPHR-VTAVSIHPWYN 137


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 32.7 bits (71), Expect = 0.064
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +1

Query: 31  FIASTAVAAVPEASQRIIGGAQTTIQTYPSVVALLFXXXXVFRQACGGCILNTRSVLTAA 210
           ++   A  A      R++GG +T    +P   AL           CG  IL+   ++TAA
Sbjct: 11  YVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAA 68

Query: 211 HC 216
           HC
Sbjct: 69  HC 70


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 154 FRQACGGCILNTRSVLTAAHC 216
           F   CGG ++  + VLTAAHC
Sbjct: 58  FEVICGGTLITLKHVLTAAHC 78


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 0.60
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 166 CGGCILNTRSVLTAAHCPFG--DAAARWRIRLGSTAAN 273
           CGG ++    V+T+AHC F   D A   ++ LG    N
Sbjct: 46  CGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLN 83


>AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical
           protein Y105E8A.5 protein.
          Length = 576

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 29  CSSLLRLWQPFLKPVKGLSVEPKRRFKRTRVSLRCYLIIIMYSDKPAAVV 178
           C S +++ +PF+ P+K L+       K  R+    YL+  +  +KP A V
Sbjct: 311 CPSKIKMLEPFIYPLKQLAAVIAVFDKEIRMYNEHYLLDTVQYEKPLAWV 360


>U80441-2|AAB37652.1|  139|Caenorhabditis elegans Hypothetical
          protein F27C1.4 protein.
          Length = 139

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 25 YLFIASTAVAAVPEASQRIIGGA 93
          Y F+++T V AV E +  ++GGA
Sbjct: 9  YTFMSTTVVPAVTEQAANLVGGA 31


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -1

Query: 288 CNTTAVSRCGTQPNAPSCCSIAERTVGGCEYRSRVQNTTAA 166
           C+T+   +CG   +AP+ C   ++ +  C   S   N  +A
Sbjct: 242 CHTSFCVKCGADYHAPTSCETIKQWMTKCADDSETANYISA 282


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +1

Query: 70  SQRIIGGAQTTIQTYP-SVVALLFXXXXVFRQACGGCILNTRSVLTAAHC 216
           S ++  G   +    P SV   L+         C G I++ R +L A HC
Sbjct: 160 SAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 166 CGGCILNTRSVLTAAHCPFGDAAARW 243
           C G + + R +LTA HC        W
Sbjct: 75  CSGTLTSPRHILTATHCAATYTETEW 100


>AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical
           protein C49D10.8 protein.
          Length = 662

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 78  DYRWSPNDDSNVPECRCV 131
           +YRWS ND SN+    C+
Sbjct: 400 NYRWSINDHSNLDSPTCI 417


>AF077536-10|AAK31408.2|  229|Caenorhabditis elegans Hypothetical
           protein C16A11.7 protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 315 VNDIPLYITCNTTAVSRCGTQPNAPSCCSIAERTVGGCEYRSRVQN-TTAAGLSE 154
           +  + + ++ N+T    C   PN  S  S + +   G + RS   N   AA L+E
Sbjct: 50  IRKVAISVSSNSTTELPCAQSPNVGSRTSDSHQLTLGSDLRSEPNNLNIAATLAE 104


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 321 ATVNDIPLYITCNTT--AVSRCGTQPNAPSCCSIA 223
           A V DIPL  + N +  AV+  G  P+A  CC+IA
Sbjct: 254 ALVEDIPLESSVNLSVRAVTEHGHSPDA--CCTIA 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,161,712
Number of Sequences: 27780
Number of extensions: 159861
Number of successful extensions: 437
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)